Pairwise Alignments

Query, 419 a.a., sodium:proton antiporter from Pseudomonas simiae WCS417

Subject, 666 a.a., sodium/hydrogen exchanger family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 86/357 (24%), Positives = 164/357 (45%), Gaps = 47/357 (13%)

Query: 66  FGDLLMNWM---LSFLLFAGALHVNLNDLRSYRWPIGLLATFGVLIATVVIGSLAYYIFA 122
           FGDLL   +   ++ +LF GAL +N  +++ Y   +  L T G+++  V I SLA + F 
Sbjct: 54  FGDLLFPMISLGVAIILFEGALTLNFKEIKDYGRMVTHLVTIGMVVTWVAI-SLATHYFM 112

Query: 123 LFGWHVSFLYCLLFGALISPTDPIAVLGVLRTANASKPLKTTIVGESLFNDGTAVVVFTV 182
            F W +++    LFGAL+  T P  ++ +LR+      L + +  E +  D    V+  +
Sbjct: 113 GFDWALAW----LFGALVVVTGPTVIVPMLRSVRPKSQLASILRWEGIVIDPIGAVLAVL 168

Query: 183 LLGIAQLGETPTVGATAMLFAHEAIGGVAFGGLIGYLV-YLMIKSIEQHQIEVMLTLALV 241
           +       +  T     M F      G   G  +GY+V +++ K +  H +     L ++
Sbjct: 169 VFEYIAASQNAT-EHILMSFGSILALGFGVGAAMGYVVGWVLRKDLLPHYLRNTAVLTVM 227

Query: 242 IG---GSAMATELHVSAPIAMVVAGLIIGNLGRKLAMNDMTRRYLDGFWELLDDMLNALL 298
           +G   GS +  E   S  + + V G+ + N+ R + + D+       F E L  ++ + L
Sbjct: 228 LGTFVGSNLLQE--ESGLLTVTVMGIWLANM-RGVDIADILE-----FKETLTVLMISAL 279

Query: 299 FALIGMEL---LLLPFNWLHVLAASLLAVAILLSRLLTV-----APAILLLRRWRTVPRG 350
           F L+   L    +L   W  +    +LAVA+L++R L+V        +    +W      
Sbjct: 280 FILLAARLDSTAMLDLGWGGI---GVLAVAMLIARPLSVWLSGIGTNLTAPEKW------ 330

Query: 351 TIRILTWGGLRGGVSVALALALPLG------PERDLLLSITYIVVLSSILLQGLSIG 401
               L+W   RG V+ A++    +       P  + ++ + +++++ ++++Q LS G
Sbjct: 331 ---FLSWVAPRGIVAAAVSSLFAIKLEEQGVPGAEKIVPLVFLIIIGTVVIQSLSAG 384