Pairwise Alignments

Query, 419 a.a., sodium:proton antiporter from Pseudomonas simiae WCS417

Subject, 572 a.a., potassium/proton antiporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  102 bits (253), Expect = 4e-26
 Identities = 107/356 (30%), Positives = 171/356 (48%), Gaps = 30/356 (8%)

Query: 62  GQIDFGD-----LLMNWMLSFLLFAGALHVNLNDLRSYRWPIGLLATFGVLIATVVIGSL 116
           G I F D     L+ N  L+ +L  G L   ++  R   WP   LAT GV I TV+ G L
Sbjct: 51  GGIQFNDYSTAYLVSNLALAVILLDGGLRTKMSSFRLALWPSLSLATLGVAITTVLTGLL 110

Query: 117 AYYIFALFGWHVSFLYCLLFGALISPTDPIAVLGVLRTANASKPLKTTIVGESLFNDGTA 176
           A ++F L     + L  LL GA++  TD  AV  +L+    ++ + +T+  ES  ND  A
Sbjct: 111 AAWLFDL-----NLLMGLLIGAIVGSTDAAAVFSLLKGRALNERVGSTLEIESGSNDPMA 165

Query: 177 VVVFTVLLG-IAQLGETPTVGATAMLFAHEAIG-GVAFGGLIGYLV-YLMIKSIEQHQIE 233
           V +   L+  IA  G     G    L     +G    FGG  GYL+ +L+ +S+    + 
Sbjct: 166 VFLTVSLIAMIAAGGNFDGPGLMRDLALQAGMGLAAGFGG--GYLIWHLVNRSVLADGLY 223

Query: 234 VMLTLALVIGGSAMATELHVSAPIAMVVAGLIIGNLGRKLAMNDMTRRYLDGFWELLDDM 293
            +L LA  +   A+++    S  +++ + GL +GN G  +     T   +DG    L  +
Sbjct: 224 PILVLAGGLLLFALSSLAGGSGILSIYLYGLFLGNRG--MRGKHSTLAVMDG----LTWL 277

Query: 294 LNALLFALIGMELLLLPFNWLHVLAASLLAV--AILLSRLLTVAPAILLLRRWRTVPRGT 351
               +F ++G  LLL P + L VL   L+     I ++R L V  ++   +R+    R  
Sbjct: 278 AQIGMFLVLG--LLLTPSSLLEVLLPGLVLALGMIFIARPLAVWISLAPFKRFVARERW- 334

Query: 352 IRILTWGGLRGGVSVALALALPLG--PERDLLLSITYIVVLSSILLQGLSIGKLVK 405
              ++W GLRG V + LA+   +   P  +L  ++ + VVL S+LLQG ++   +K
Sbjct: 335 --FISWVGLRGAVPIILAVFPMMAGLPNAELYFNLAFCVVLVSLLLQGSTLPLAMK 388