Pairwise Alignments

Query, 419 a.a., sodium:proton antiporter from Pseudomonas simiae WCS417

Subject, 788 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  111 bits (277), Expect = 9e-29
 Identities = 94/309 (30%), Positives = 146/309 (47%), Gaps = 20/309 (6%)

Query: 75  LSFLLFAGALHVNLNDLRSYRWPIGLLATFGVLIATVVIGSLAYYIFALFGWHVSFLYCL 134
           L  LLF   L +NL  +     PI +LA   V++AT+ +G    +   L         CL
Sbjct: 31  LPTLLFQATLGMNLRRMLDDWVPIMVLAVVAVVVATLSVGYALSWATTL-----PLAACL 85

Query: 135 LFGALISPTDPIAVLGVLRTANASKPLKTTIVGESLFNDGTAVVVFTVLLGIAQLG-ETP 193
           L GA++S TDP AV+ + R+ +A + L   I GESL ND  A+ +F + +G   LG   P
Sbjct: 86  LIGAIVSTTDPSAVVSIFRSISAPRRLARIIEGESLLNDAAAIALFGLFMGFVMLGVPNP 145

Query: 194 TVGATAMLFAHEAIGGVAFGGLIGYLVYLMIKSIEQHQIEVMLTLALVIGGSAMATELHV 253
            +      F     GG   G L   +   ++ S   H++ ++L    +   + +  E  +
Sbjct: 146 ELSDALARFPVLIAGGALTGWLAARVAIWIMASFHAHELALILVSVALPYLAYIGAEQSI 205

Query: 254 SAP--IAMVVAGLIIGNLGRKLAMNDMTRRYLDGFWELLDDMLNALLFALIGM------- 304
            A   IA+V AGL + NL     +       L   W+LL     AL+F L  +       
Sbjct: 206 GASGVIAVVAAGLTL-NLSGPGRLPPQAWANLREVWDLLAHWAGALIFILAALLIPRLLE 264

Query: 305 ELLLLPFNWLH-VLAASLLAVAILLSRLLTVAPAILLLRRWRTVPRGTIRILTWGGLRGG 363
           ++ +  F  +  V+ A++ A A++L  LL   P + +LR    V R     + WGGLRG 
Sbjct: 265 DVRVSDFILIGVVIVAAIAARAVILFGLL---PLLAILRLSPPVERPYRVAILWGGLRGA 321

Query: 364 VSVALALAL 372
           V++ALALA+
Sbjct: 322 VTLALALAV 330