Pairwise Alignments

Query, 554 a.a., NAD-dependent DNA ligase LigB from Pseudomonas simiae WCS417

Subject, 679 a.a., NAD-dependent DNA ligase LigA from Synechococcus elongatus PCC 7942

 Score =  143 bits (360), Expect = 2e-38
 Identities = 146/584 (25%), Positives = 254/584 (43%), Gaps = 62/584 (10%)

Query: 25  TARAQ-VNTLTEQIRLWDDSYHRLNQSPVSDELYDQAHQRLTHWRRCFPESPPKPDNPL- 82
           TA AQ  + L + ++    +Y+ L+Q  + D +YD+ ++ L    +  P S   PD+P  
Sbjct: 11  TAIAQRASELRQLLQQASYAYYVLDQPVMEDAVYDRLYRELQDLEQQHP-SLITPDSPTQ 69

Query: 83  ------ASSRGTLRHPIAHTGLEKLLDEQAVGAW----------LSTRQDVWIQPKVDGV 126
                 A+   +++H I    LE   D + + +W          +        + K+DG 
Sbjct: 70  RVGEQPATGFESVQHRIPLYSLENAFDAEELRSWDQRWRKLAPDVPADAGYVCELKIDGA 129

Query: 127 AVTLVYRQGRLRQVISRGDGLMGHDWSASARRIPGIVQQLPE---PIDLVLQGELYWHLD 183
           A+ L Y  G L +  +RGDG  G + +A+ R I  I  +L     P  L ++GE +  L 
Sbjct: 130 AIALSYENGLLVRGATRGDGTRGEEITANLRTIKSIPLRLQTDQPPEWLEVRGEAFLSLT 189

Query: 184 DHVQ-----SANGGL---NARSKVAGLMNRLELSDADAAGIGLFVWAWPEGPGSFTE--- 232
              Q       +G     N R+  AG + +L+        +  F ++  +GP  +     
Sbjct: 190 RFKQLNTEREKHGEALFANPRNAAAGTLRQLDPRIVAERQLDFFAYSI-QGPNDWANLDQ 248

Query: 233 --RLAALARWGFTDSRRYSQPIRDIAEATHWRAYW--YNHPLPFASDGVVLHQAQRPPAR 288
              L  L   GF     + Q    +AE   + + W      LP+ +DGVV+    R    
Sbjct: 249 AASLDCLQSLGFR-VEPHRQTCPTLAEVEQYFSDWDARRRDLPYLTDGVVVKLQSRRLQD 307

Query: 289 RWKASE--PYWAVAWKYPAAKALALVRNVRFKIGRTGRITPMLELEPVQLDDRQISRVSA 346
               ++  P WA+A KYPA +A   +++V  ++GRTG +TP+ E  PV L    +SR + 
Sbjct: 308 ELGFTQKFPRWAIALKYPADEAPTQLQHVTVQVGRTGALTPVAEFSPVALAGTTVSRATL 367

Query: 347 GSLKRWQTLDIRPGDQVSISLAGQVIPRLDEVI--LRNAHRADLAAPD-----------P 393
            +  R + LD+  GD + +  AG++IP +  V+  LR A    +  P+           P
Sbjct: 368 HNADRLRELDLHIGDTIVVRKAGEIIPEVVRVLTDLRPADAKPVVLPEKCPECGQPVQRP 427

Query: 394 RDFHALSCWQLDPGCEEQLLARLTWLSGNQGLALPHIGRETWNVLIQAGLIASFLDWLTL 453
            +     C  ++  C   +   LT  +    L +  +G +  + L+  GL+ +  D   L
Sbjct: 428 EEEAVTRC--VNSTCPAIVRGALTHWASRDALDIEGLGEKLVDQLVSKGLVNAIADLYRL 485

Query: 454 DVAELANIEGFGDSSRTRVLESLNSARQRSFAQWLKALGVPPAARNNLEGDWQTLVARDT 513
           D   LA++E FG+ S   +++++  +RQ+ +++ L  LG+      N +    T  + + 
Sbjct: 486 DAPLLASLERFGEKSAQNLVQAIAKSRQQPWSRVLYGLGIRHVGSVNAKNLAATFTSAEA 545

Query: 514 QA------WLAIDGIGPGRAAQLSAFFRDPQVQALADTLRVAGI 551
            A        A+ GIG   A  +  +F     Q L   L  AG+
Sbjct: 546 LAQATPDELAAVYGIGSEIADAVHQWFTVATNQNLIAALEQAGL 589