Pairwise Alignments

Query, 221 a.a., alginate lyase from Pseudomonas simiae WCS417

Subject, 218 a.a., Alginate lyase precursor (EC 4.2.2.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  204 bits (519), Expect = 1e-57
 Identities = 100/220 (45%), Positives = 138/220 (62%), Gaps = 3/220 (1%)

Query: 1   MIDLSTWNLSIPVGSPPATIDTPKLMNGFNDQYFQAEGSNVQFWTPVTGTRTENAVYPRS 60
           MIDL+ WN+++PV +P   + T K M    ++YF   G  + FW PVTG+ T  + YPRS
Sbjct: 1   MIDLTVWNITLPVQTPAQVVAT-KAMPTLKNKYFDNNGQRIVFWAPVTGSHTGKSEYPRS 59

Query: 61  ELRETYADGRLRNWTYPDADNFLRATLAVNQVPSTGKIVIGQIHAYDSQKPLIKLEYQFK 120
           ELRET  DG+LRNW Y    N L+ TLAVNQVPS G++V+ QIHA D+  PL+KL Y++ 
Sbjct: 60  ELRETSKDGKLRNWRYNSGTNTLKGTLAVNQVPSEGRVVVAQIHAKDAPTPLLKLVYRYA 119

Query: 121 EKTQTGNIVAKVRMRPDEDEGRVIIVASNVPLEKSFTYVINLNKAGLLSVYAADGEWNER 180
           +   TGNI  + R++P + +  VI    NVPL K+F+Y + ++K G LSV   +     +
Sbjct: 120 K--GTGNIDVEYRVKPKDKKSPVIYTVPNVPLNKTFSYSLQMDKQGKLSVLIGNSGKQVK 177

Query: 181 IGAAWGAKPLYFKAGAYVQDNSGDSKEGARVTFAKLDIDH 220
           +  +W     YFKAG Y  DN G S EG +VT+ KLD+ H
Sbjct: 178 LDPSWYGYNFYFKAGVYTLDNKGYSNEGGKVTYTKLDVSH 217