Pairwise Alignments

Query, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 280 a.a., periplasmic binding protein, putative from Pseudomonas fluorescens FW300-N1B4

 Score = 68.6 bits (166), Expect = 1e-16
 Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 11/249 (4%)

Query: 1   MPRFSRAVALIGVLLLAQPAFAQRLRLVADAWPPFTDATLING-GLATDIVSTALA--RA 57
           MP  ++ + ++    L+  A  ++LR+V + W P+      NG  L  D  +TA+   R 
Sbjct: 10  MPLIAQLLTMLLFTCLSLTARGEKLRIVTEPWAPYVYEE--NGKSLGLDYETTAIVFKRL 67

Query: 58  GYASDFEQVPWARALMGVGDGRYDVLVNAWYDDARTQLGQFSGEYLLNRVRFIK--RRDD 115
           G   +++ +PW R L  +  G+ D +++ ++   R     +  E  L++V F+     + 
Sbjct: 68  GIDVEWQFLPWKRCLSMLEQGQADGVLDIFHSAERDATLLYPSE-PLSQVEFVMFYANER 126

Query: 116 PIEFQNLEQLHDYPIAVVRGYAYSAAFDGDAQLQKVPVHNFAMAVRMLAAQRVRLTVEDE 175
           P  F+ L+ L    I    GY YS  F       + P          L   R+ L + D 
Sbjct: 127 PYPFRTLDDLKGLTIGTSPGYLYSKDFSESTLFTQEPAPTHEANFGKLVRGRIDLLITDR 186

Query: 176 YVARYYLSRESTRVRNTVEFLPKPLSENSLHILVSLKNPEHAQIVASFDREIAKMKADGS 235
            V ++ L  +   +R+ +   P  +S+ S  + V  +N     +V  F  E+ + K + +
Sbjct: 187 RVGQHLL--DQLNIRDKITENPIIISQQSQFLAVR-RNAGMDLLVQRFGAELKRFKREPA 243

Query: 236 YARLMKQHG 244
           YA L  ++G
Sbjct: 244 YAELSARYG 252