Pairwise Alignments

Query, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  176 bits (445), Expect = 6e-49
 Identities = 95/238 (39%), Positives = 137/238 (57%), Gaps = 3/238 (1%)

Query: 10  LIGVLLLAQPAF--AQRLRLVADAWPPFTDATLINGGLATDIVSTALARAGYASDFEQVP 67
           L+G++LL   A   A+ LRL  + WPP+TD +L   GL+ +++ TAL R GY  ++ +VP
Sbjct: 45  LLGLILLLASASLPAEVLRLAGNLWPPYTDRSLPGEGLSVELIRTALGRGGYQVEYIEVP 104

Query: 68  WARALMGVGDGRYDVLVNAWYDDARTQLGQFSGEYLLNRVRFIKRRDDPIEFQNLEQLHD 127
           W RAL+G+  G YD LVN W    R      S  +L+NR+R+++RR   I +  L+ L  
Sbjct: 105 WERALLGLRKGSYD-LVNGWPAVKRVDYSLSSRAFLINRMRWVQRRGSGIRYDGLDSLTG 163

Query: 128 YPIAVVRGYAYSAAFDGDAQLQKVPVHNFAMAVRMLAAQRVRLTVEDEYVARYYLSREST 187
           Y + + RGY YS   D D +LQK    NF  A  M+ A R  LT+EDE  A ++  RE  
Sbjct: 164 YLLVLSRGYTYSDELDADTRLQKGYAANFVQAATMVLAGRADLTLEDERTALFHFERELG 223

Query: 188 RVRNTVEFLPKPLSENSLHILVSLKNPEHAQIVASFDREIAKMKADGSYARLMKQHGM 245
             R+ + F+P       L +LV   +P    I+A+F+REIA M ADGSYA +  +H +
Sbjct: 224 HERDALAFVPGEFRRVELSLLVRRDHPRATDIIATFNREIAAMLADGSYAAIFVRHAL 281