Pairwise Alignments

Query, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 262 a.a., periplasmic binding protein, putative from Acidovorax sp. GW101-3H11

 Score = 75.9 bits (185), Expect = 8e-19
 Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 15/249 (6%)

Query: 6   RAVALIGVLLLA----QPAFAQRLRLVADAWPPFTDATLINGGLATDIVSTALARAGYAS 61
           R + L+  LLLA        A+ LR+     PP+  +   + G++  IV  A A+AG   
Sbjct: 3   RHLCLLWGLLLACVGGASVRAETLRIATGELPPYASSDRADQGMSLHIVRQAFAKAGVQV 62

Query: 62  DFEQVPWARALMGVGDGRYDVLVNAWYDDARTQLG-QFSGEYLLNRVRFIKRRDDPIEFQ 120
           ++  +PW RAL+   DG++D    AW  +A    G   S   L  + + + R D    + 
Sbjct: 63  EYVFLPWTRALVETRDGKWDATA-AWGRNAERDKGFLVSDNVLTEQWQILYRSDRNFTWS 121

Query: 121 NLEQLHDYPIAVVRGYAYSAAF-----DGDAQLQKVPVHNFAMAVRMLAAQRVRLTVEDE 175
           +L+ L    I VV  Y+Y+  F     DG  +    P  +    +  L A RV +   D 
Sbjct: 122 SLQDLAGLRIGVVADYSYTPVFWRMVKDGTLRADVAP--DDVSNLNKLLAGRVDVVPLDR 179

Query: 176 YVARYYLSREST-RVRNTVEFLPKP-LSENSLHILVSLKNPEHAQIVASFDREIAKMKAD 233
            VA   L  + T    + V   PK  + + + H+++S K P  A+ + +F+R +  ++  
Sbjct: 180 NVACDLLGAKFTGEQAHRVRAHPKLFVPDFTTHLMMSEKLPASAKRLEAFNRGLKALRQS 239

Query: 234 GSYARLMKQ 242
           G Y ++++Q
Sbjct: 240 GEYGKILQQ 248