Pairwise Alignments

Query, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 257 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 43/147 (29%), Positives = 60/147 (40%), Gaps = 5/147 (3%)

Query: 44  GLATDIVSTALARAGYASDFEQ---VPWARALMGVGDGRYDVLVNAWYDDARTQLGQFSG 100
           G+A D+++ A  R     D      VPWAR       G+  VL +      R  L  + G
Sbjct: 50  GIAVDLLAAAARRVDGRFDIHSIQLVPWARGYKLTRTGKNTVLFSTTRTPYREPLFDWVG 109

Query: 101 EYLLNRVRFIKRRDDPIEFQNLEQLHDYPIAVVRGYAYSAAF--DGDAQLQKVPVHNFAM 158
                R+    R D  I   ++EQL+ Y I V+       A    G A+ Q    H    
Sbjct: 110 PISATRIVIFARADRVIHITDVEQLNQYSIGVIAQDIGEQALLAAGIAREQLRRAHEATS 169

Query: 159 AVRMLAAQRVRLTVEDEYVARYYLSRE 185
            V ML  +RV L   +E V RY + +E
Sbjct: 170 LVHMLRRERVDLWAYEEVVGRYLMKQE 196