Pairwise Alignments

Query, 392 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 397 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  436 bits (1122), Expect = e-127
 Identities = 216/388 (55%), Positives = 279/388 (71%), Gaps = 2/388 (0%)

Query: 5   EVVIIGAGAAGLMCALTAAGRGRKVMLIDHANKAGKKILMSGGGRCNFTNMYTEPANFLS 64
           +V+IIGAGAAGLMCALTA  RGR V+L+D+A + G+KIL+SGGGRCNFTN+ T+P+ +L 
Sbjct: 8   QVIIIGAGAAGLMCALTAGYRGRDVLLLDNAKQLGRKILISGGGRCNFTNLQTQPSAYLC 67

Query: 65  HNAHFCKSALARYTQWDFIGLVAKHGVPYHEKKLGQLFCDNKSSDILGMLLDECIQVGVS 124
            N HF KSALAR+TQWDFI +V +HG+ YHEK LGQLFCD  + +I+ ML  EC   GV 
Sbjct: 68  ANPHFVKSALARFTQWDFIAMVERHGIAYHEKTLGQLFCDESAKEIVEMLTTECDWAGVK 127

Query: 125 LHLDTSVQEIAKLEAGYQLQTTLGELRCESLVIATGGLSIPTLGATGFGYQVAKQFGHEL 184
           + L T V  ++K E G++L T+ G   CESLVIATGGLS+P LGAT FG+++A+QFG  +
Sbjct: 128 IQLRTEVLTVSKTETGFELHTSEGHFSCESLVIATGGLSMPKLGATPFGFKLAQQFGLRV 187

Query: 185 LPTRAGLVPFTITDQLKDLCGELSGTSVDCLV-SCNGQSFRENILFTHRGLSGPAILQIS 243
           LPT AGLVPFT+  + K     L+G S+   V S +GQSF E +LFTHRG+SGPAILQIS
Sbjct: 188 LPTTAGLVPFTLQPEDKSHFECLAGVSLPVTVTSASGQSFSEALLFTHRGISGPAILQIS 247

Query: 244 SYWEPGDTVEINLLPDHDAHTWLQQQQVERPNSELKTLLGEIFTKKMANLLAETWFV-SK 302
           SYW+PG+ V I+LLP  +   W +   +E P   +K  L  +  K+    L E   +  K
Sbjct: 248 SYWKPGEAVSIDLLPGLNFVDWYKTISIESPKLSIKNALSRLLPKRFVERLQEIGAIPDK 307

Query: 303 PMKQYTHAEIADIAQKLGSWQLVPAGTEGYRTAEVTLGGVDTREVSSKTMESLKSPGLYF 362
            + Q++ AE+  +A    +W + P GTEGYRTAEVTLGGV T E+SSKT+E+    GLYF
Sbjct: 308 ALNQFSKAEVEALADYFANWSIAPGGTEGYRTAEVTLGGVCTDELSSKTLEAKACKGLYF 367

Query: 363 IGEVLDVTGHLGGFNFQWAWASGYAAAQ 390
           IGEV+DVTG LGG+NFQWAW+SG+AA +
Sbjct: 368 IGEVVDVTGWLGGYNFQWAWSSGHAAGE 395