Pairwise Alignments

Query, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 8/224 (3%)

Query: 50  NPLALIGLIALLAHFIQRKWG---LTVFVIASFLLILNLG--YWQETMETLAQVLFATLV 104
           N   L  L  LLA  +Q  W    L   V  +   + N G  +W   +  L  V  AT+ 
Sbjct: 6   NLFRLTVLAVLLAFLVQPAWFEPLLKPLVQENAPAVYNQGSLFWLTVLH-LRTVFVATVA 64

Query: 105 CVVIGVPLGIVAAHKP--MFYTMMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVV 162
             ++ V L I+   K    F  + R ++++ QT P    L   + ++G G  P LI+  +
Sbjct: 65  ATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYGFGEKPTLIALFL 124

Query: 163 FAIAAPIRLTYLGIRDVPQELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSL 222
           + +         G+  +P  +M+A +  G + RQ L RIELP A+P I  GI   +++SL
Sbjct: 125 YGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVILTGIRLSVVISL 184

Query: 223 SMVVIAALVGADGLGKPVVNALNTADIALGFEAGLAIVLLAIML 266
           +   I + V A  LG+ ++  L + ++A   + GL +  LA+++
Sbjct: 185 ATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLI 228