Pairwise Alignments

Query, 315 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 284 a.a., Substrate-binding region of ABC-type glycine betaine transport system from Pseudomonas syringae pv. syringae B728a

 Score =  108 bits (271), Expect = 1e-28
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 21/276 (7%)

Query: 25  AQCQTVNFSDV-GWTDITVTTATTSEILKG-LGYKPRTTMISVPVTYKSLADGKNMDVFL 82
           A+ +T+    V GW+D   TT   SE++K  LGY  +   ++  + ++++A  K +D+ L
Sbjct: 24  AETKTLTIGYVEGWSDSVATTFVASEVIKQKLGYDVKLQSVAAGIMWQAVATDK-LDLML 82

Query: 83  GNWMPTMENDI-KQYRDAGTVETVRANLENAKYTLAVPEALYNKGLKDFADIAKFKDELG 141
             W+P    +   +Y+D   V     N ++AK  L VPE +  K ++D    A F     
Sbjct: 83  SAWLPGTHGEYYAKYKDQ--VVNYGPNFKDAKIGLIVPEYVKAKTIEDLKTDASFNK--- 137

Query: 142 GKIYGIEPGNDGN-RTIQTLIDKDAFGLKTAGFKVVESSEAGMLSQVERATKRDQAIVFL 200
            KI GI+ G+    +T Q + D   +GL   G+K+  SS AGM++++ RA K  ++IV  
Sbjct: 138 -KITGIDAGSGVMLKTDQAIKD---YGLD--GYKLQASSGAGMIAELTRAEKAKKSIVVT 191

Query: 201 GWEPHPMNTRFKMKYLTGGDDSFGPNYGQATIYTNTRK-GYTEECSNVGQLLKNLVFTLN 259
           GW PH M  ++K+++L   DD  G  YG+A    N    G  ++   V   LK   +   
Sbjct: 192 GWVPHWMFAKWKLRFL---DDPKGV-YGEAETVDNVASLGLEKKAPEVVAFLKKFQWASK 247

Query: 260 MESTLMGNVLDDKMKPDAAAKAWLKKNPQVLDTWLA 295
            E   +   + D  KP+AAAK W+ K+P  +  W A
Sbjct: 248 DEIGEVMLAIQDGAKPEAAAKDWVAKHPDRVAAWTA 283