Pairwise Alignments

Query, 314 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 10/263 (3%)

Query: 33  VRMGVVNWTDVIATSAMTQVLLDGLGYKTKQTSASQQIIFAGIRDQRLDLFLGYWNPLMT 92
           ++ G+  W  V   S + +V+L+  GY  +       I +A + D  LD+ L  W P   
Sbjct: 36  IKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTH 95

Query: 93  QTI-TPFVDAKQVKVLDKPSLEDARATLAVPTYLADKGLKTFADIAKFEKELGGKIYGIE 151
           +   T +    Q++++   ++      LAVPTY  + G+++  D+   E+   GKI GIE
Sbjct: 96  EEYWTQY--GNQLEMVHV-NVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIE 152

Query: 152 PGSGANTQIKAMIAKNQFGLGKFQLVESSEAGMLAAVDRAVRRKEAVVFFGWAPHPMNVN 211
           PG+G  +  +  I  + + L  ++L  SS   M+A + RA+   E +V   W PH +   
Sbjct: 153 PGAGIMSNTEKAI--DSYSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFK 210

Query: 212 VAMTYLTGSDDALGPNEGMATVWSVTAPNYAEQCPNVHKLLTNLTFTAADESRMMQPLLD 271
             +  L   +   G  +    V+++   ++ +  P V++         + +S  +    D
Sbjct: 211 FDIKMLDDPEKVYGNGD---KVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSD 267

Query: 272 H-KDAIESAKQWLKDHPQDQARW 293
              D  E A++W+ ++P+  A W
Sbjct: 268 EGMDPEEVAEEWVANNPELVANW 290