Pairwise Alignments

Query, 314 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 367 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas fluorescens FW300-N1B4

 Score =  252 bits (643), Expect = 1e-71
 Identities = 133/308 (43%), Positives = 195/308 (63%), Gaps = 1/308 (0%)

Query: 3   QDFYFLLMPGFSAIGFISALEPLRVANRFRG-ELYRWHVLSADGGAVLASNGMSVNADAA 61
           Q   FLL+  F+ I   SA+EPLR+AN+  G ELYRW  L+ DGG V AS+G+ +  DA+
Sbjct: 16  QSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWTTLTVDGGQVWASDGLQITPDAS 75

Query: 62  LEPLKKGATLLVVAGFEPLQFATPALEHWLRRLDHEGVTLGAIDTGACVLAEAGLLDGHR 121
           +       T++V  G    +  T     WL+    +   LGA+ TG+  LA AGLLDG  
Sbjct: 76  MHKAPPLDTVIVCGGIGIQRTVTREHVSWLQSQARQHRRLGAVCTGSWALACAGLLDGFD 135

Query: 122 LTLHWEAIDAFKEAYPQLTVTQELFEIDRRRITCAGGTASIDLMLDLIAQAHGPELAIQV 181
            ++HWE + + +EA+P++ ++  LF +DR R T +GGTA +D+ML LI++ HG EL+  +
Sbjct: 136 CSVHWECLASMQEAFPRVAMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSAAI 195

Query: 182 SEQFVLGRIRPRKDHQRMQIATRYGINNKKLVQVIGEMEQHTEPPLSTLALAEAIKVTRR 241
           SE FV  RIR  +DHQR+ +    G N  KL +++  ME + E P+    LA  + V+RR
Sbjct: 196 SEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVAVSRR 255

Query: 242 QLERLFRLHLNDTPSNFYLGLRLEKARQLLRQSDMSVLEVSIACGFESPSYFTRSYRARF 301
           QLERLF+ +L+ +PS +YL LRL +ARQLL+Q+ MS++EV+  CGF S  +F++ YR  F
Sbjct: 256 QLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYREYF 315

Query: 302 AKCPREDR 309
              PR++R
Sbjct: 316 GIPPRDER 323