Pairwise Alignments

Query, 222 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (355), Expect = 1e-38
 Identities = 90/223 (40%), Positives = 125/223 (56%), Gaps = 9/223 (4%)

Query: 1   MPHILIVEDEAAIADTLIFALQGEGFTTTWLTLGQAALEHQRQTPADLIILDIGLPDITG 60
           M HIL+++D+  +   L   LQ EGF  +    G+A L        DLI+LD+ +P + G
Sbjct: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSDE-IDLILLDVMMPKLNG 59

Query: 61  FETCKQLRRFSEVPVMFLSARDGEIDRVVGLEIGADDYVVKPFSPREVTARVRAILKRIG 120
            ET K+LR     PV+ L+A+  EIDRV+GLE+GADDY+ KPFS RE+ AR+RAIL+R  
Sbjct: 60  METLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119

Query: 121 PGAAPAVFQV-DLERMQI------AY-RGQPLSLTRHEFRLLQSLLEQPERVFSREQLLD 172
            G  P    V + + +Q+      AY +GQ L LT  EF LL   ++ P    ++E L  
Sbjct: 120 NGLTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSI 179

Query: 173 AVGVAADAGYERNIDSHIKSLRSKLRSVAADAEPIQTHRGLGY 215
            V     A ++R ID H+ +LR KL         I+T RG GY
Sbjct: 180 EVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGY 222