Pairwise Alignments

Query, 222 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 257 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  154 bits (390), Expect = 1e-42
 Identities = 94/229 (41%), Positives = 131/229 (57%), Gaps = 17/229 (7%)

Query: 4   ILIVEDEAAIADTLIFALQGEGFTTTWLTLGQAALEHQRQTPA---------DLIILDIG 54
           IL+VEDEA I D +   LQ EGFT      G+ AL + R             DL++LD+ 
Sbjct: 26  ILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDLM 85

Query: 55  LPDITGFETCKQLRRFS-EVPVMFLSARDGEIDRVVGLEIGADDYVVKPFSPREVTARVR 113
           LP + G + C+ LRR    VP++ LSA+D E DRVVGLEIGADDY+ KPF  RE+ AR R
Sbjct: 86  LPAVNGLDFCRLLRRQGVTVPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVARCR 145

Query: 114 AILKRI--GPGAAPAVFQVD-----LERMQIAYRGQPLSLTRHEFRLLQSLLEQPERVFS 166
           A+L+R    P   PAV + +      E  ++    + L+L+  EFRLL+  +  P RV+S
Sbjct: 146 ALLRRSQNQPAETPAVLRYEGLKLFPEECRVLLDDRELTLSPKEFRLLELFMRHPRRVWS 205

Query: 167 REQLLDAVGVAADAGYERNIDSHIKSLRSKLRSVAADAEPIQTHRGLGY 215
           R+QLL+ +      G  + ID HI+ LR K+ +  ++   + T RG GY
Sbjct: 206 RDQLLEKIWGIDFMGDSKTIDVHIRWLREKIEANPSNPSYLLTVRGFGY 254