Pairwise Alignments

Query, 479 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 614 a.a., ATP-binding protein from Methanococcus maripaludis JJ

 Score = 89.0 bits (219), Expect = 4e-22
 Identities = 87/395 (22%), Positives = 182/395 (46%), Gaps = 40/395 (10%)

Query: 92  NHRIYVTDAKGTVLLDSTGEAVGQDYSKWNDVYLTLRGEYGARSTRSELDDPTSSVMHVG 151
           N RI  T  K  V  D  GE   +D      +Y T+  +   RST +    P  +     
Sbjct: 214 NVRISTTCQKDGV--DFVGELADED------IYETVSKKQDVRSTVTINGVPYLAKY--- 262

Query: 152 APIRD-NGQIIGVVTVAKPNSSLQPYVDRTERRLLWYGAGLVILGLLLGALLSWWLSVAL 210
           +PI + +G++IG+  V  P S     ++   +++ +     +I+ + +  +L+  +  ++
Sbjct: 263 SPIYNIDGEVIGMTCVGTPKSPFTVLLNSVIQKIFFIAFSSLIIAVFVAVILNKKIVDSI 322

Query: 211 RRLTAYAEAVSEGRRAELPHY-RGGELKQLSTAVEHMRTQL-EGKAYVEHYVHTL----- 263
           ++L   AE+   G   E      G EL++L+ +   M  ++ +    ++   HTL     
Sbjct: 323 KKLKNSAESFGRGNYDERASIDTGDELEELAESFNKMADEIRKSDKKLKSDAHTLKTSFD 382

Query: 264 ----------------THELKSPLAAIRGAAELLQGDMS---REQQQRFVGNIDSESARL 304
                           +HEL++PL AI G  ELL+ + +    E+Q+ F+  I   S RL
Sbjct: 383 ELKEVDNLKSEILSIVSHELRTPLTAILGYVELLKDETAGKLSEKQKEFISVISENSDRL 442

Query: 305 QQLIERLLNLAQVEQRQGLEEQASISLAAMVDEVLKAQCARIEGAGLQVEQSIAAQVKVY 364
           +++ + + +L  V+ +    ++  I+L   V+++L++     E   + + + +   + + 
Sbjct: 443 KRITDNMSDLVTVDNKILDIKRDKINLKKEVNDILRSFDYFAESKNIVLLEDV-DNLDIK 501

Query: 365 GEPFLLRQALGNLLENALDFTPPGGLLRFSAQTRHNDVQVCLFNQAAPIPDYALPRLSER 424
           G+   + Q L NL+ENA+ F+     +         ++ + + +Q   IP   L ++ ++
Sbjct: 502 GDKSKIHQVLSNLIENAIKFSKKQTKVTVMGFEDKGNIHLEITDQGPGIPKEHLGKIFDK 561

Query: 425 FYSLPRPASGR-KSTGLGLNFVEEVVKLHGGALQI 458
           FY +   +      +GLGL   +++V+ HGG++ +
Sbjct: 562 FYQIDSSSKREVGGSGLGLAVCKKIVESHGGSIWV 596



 Score = 28.9 bits (63), Expect = 5e-04
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 8/90 (8%)

Query: 98  TDAKGTVLLDSTGEAVGQDYS------KWNDVYL--TLRGEYGARSTRSELDDPTSSVMH 149
           TDA G V+  S G+   +  S      + N +Y    L  E  ++ +  ELD   +  + 
Sbjct: 110 TDADGNVICASYGDDDAEISSYVKKLLEKNTIYAYDILPNEEASKYSDYELDGHDALTIF 169

Query: 150 VGAPIRDNGQIIGVVTVAKPNSSLQPYVDR 179
             API D   +IG VT     +    +VDR
Sbjct: 170 TVAPIYDGDSLIGAVTYVDIMNKDDYWVDR 199