Pairwise Alignments

Query, 236 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  162 bits (410), Expect = 5e-45
 Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 2/219 (0%)

Query: 14  ELFERYAPRFIDGLLVTAKLVAISFSLGALLGLLLALGRLSSNRWLRGITGTYMYFFRGS 73
           E+F ++ P FIDG  +T +LV +S   G ++ + L + R S +  +R +   Y++FFRG+
Sbjct: 4   EIFIKWLPSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFFRGT 63

Query: 74  PLLAQLFMLYYGLGSFKSFWQDVGLWWFFRDAWLCTLLAFTLNTAAYQAEIMRGALTAVA 133
           PLL QLF++YYG+  F    Q   LW + RD + C ++  TL+TAAY AEI+RGA+  V 
Sbjct: 64  PLLVQLFLVYYGMAQFDVVRQSA-LWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVP 122

Query: 134 PGQREAAQMLGLSRWATLQKVILPQSLLVAVGPLGNELILMIKASSIASLVTLYDLMGVA 193
            G+ EAA+ LG+SR   L  +ILP++  + +    NE+ILM+KAS++AS +TL +L G+A
Sbjct: 123 HGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMA 182

Query: 194 KLAFSRSF-DFQIYLWAAVLYLAIVEVVRRTLRRLERSL 231
           +   +R++   +++L A ++YL I  ++ +  + LER L
Sbjct: 183 RKIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLERWL 221