Pairwise Alignments

Query, 236 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 224 a.a., amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  127 bits (320), Expect = 1e-34
 Identities = 74/219 (33%), Positives = 125/219 (57%), Gaps = 11/219 (5%)

Query: 15  LFERYAPRFIDGLLVTAKLVAISFSLGALLGLLLALGRLSSNRWLRGITGTYMYFFRGSP 74
           +F    P    GL+ +  L+  S +LG L G+++  GR+    W+R     Y   FRG P
Sbjct: 7   VFGEMLPALNRGLITSMMLIVPSATLGLLFGIIVGTGRVFGPAWVRKAGDIYTATFRGVP 66

Query: 75  LLAQLFMLYYGLGSFKSFWQDVGLWWFFRDAWLCTLLAFTLNTAAYQAEIMRGALTAVAP 134
           L+ QL ++Y+GL        ++G+   + + +   +L F L +AAY +E +RGAL ++  
Sbjct: 67  LVVQLMIIYFGL-------PNIGI---YLEPFPAAVLGFVLCSAAYNSEYVRGALLSIRQ 116

Query: 135 GQREAAQMLGLSRWATLQKVILPQSLLVAVGPLGNELILMIKASSIASLVTLYDLMGVAK 194
           GQ +AAQ LG S+  T+  +++PQ++  A+   GNE+I +IK SS+A ++T  +L G  K
Sbjct: 117 GQLKAAQALGFSKLKTVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVITCIELTGEGK 176

Query: 195 LAFSRSFDF-QIYLWAAVLYLAIVEVVRRTLRRLERSLS 232
           +  +RSF F +++L+    YL +V +    L R+E+  S
Sbjct: 177 VVAARSFRFTEVFLFVGAYYLFLVTLASWILHRVEQHFS 215