Pairwise Alignments

Query, 239 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  157 bits (398), Expect = 1e-43
 Identities = 88/239 (36%), Positives = 138/239 (57%), Gaps = 19/239 (7%)

Query: 14  GWGSALLAGALVTITLALACIPLGLPLGLLVALAARSKRRWLRTGATVFSTVFRGLPELL 73
           G+ +++L GAL+TI +A+  + L + LG+L ALA  +  RW R  AT+++T+ RG+P+L+
Sbjct: 6   GYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLV 65

Query: 74  TLLIIYYGCQIAAQ-----------RMLAAMGYQGE--------VTINTFVAAMIAFSLV 114
            +++I++G QI              + L A     E        V I+ FVA ++    +
Sbjct: 66  LMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFI 125

Query: 115 FAAFSSEVWLSAFKSLSKGQFEAATMLGLPKGTTLRKVVLPQLTRIALPGLSNNWLSLLK 174
           F A+ +E +  A  ++ KG+ EAA   G+    + R+++LPQ+ R A+PG  NNWL LLK
Sbjct: 126 FGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLK 185

Query: 175 DTSLVSTISLVDLMRQTSLAVSVTKEPMLFYAVACFGYLFFSALSGRVFNFLERYFSRH 233
            T+LVS I L D++R +SLA   TK P  FY      +LFF+++S  +   LER FS H
Sbjct: 186 TTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSIH 244