Pairwise Alignments

Query, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (450), Expect = 1e-49
 Identities = 98/251 (39%), Positives = 146/251 (58%), Gaps = 9/251 (3%)

Query: 11  ATLWLLCTVAGAAHAE---TLRIASEGAYPPFNYVDSNNRLHGFDIDIANALCERMKVNC 67
           AT  +  T++G   A+   T+R   EGAYPPF++ +++  L GFD+D+ANALC  M+V C
Sbjct: 9   ATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAEMQVEC 68

Query: 68  TFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAHDSGISDA 127
             V QDW+G+IP+LLA+KYDAI+A+M++TEERKKK+ FT +Y + P        + ++  
Sbjct: 69  KIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGADLAFT 128

Query: 128 QTNFKGLTVGAQSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDGVIADKYPL 187
           +   KG+ +G Q  +T   Y  ++Y +    V+ Y S DEA  DLA GR+  V+ D   L
Sbjct: 129 KEGLKGVKIGVQRATTHDKYITDNYGDTVDIVR-YGSFDEAYLDLANGRIAAVLGDASAL 187

Query: 188 LAWVAG-AGKDCCTFLG----DIDGTNTDAAIAVRQGDVELRERLNKALDEIVADGTYKN 242
              +    G D   F+G    D         IAVR+ D EL E+L+ A+  +   G Y+ 
Sbjct: 188 EEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKGIYQQ 247

Query: 243 ISRRYFAFDIY 253
           I  +YF +D+Y
Sbjct: 248 IQAKYFKYDVY 258