Pairwise Alignments

Query, 235 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

Subject, 237 a.a., DNA polymerase III epsilon subunit-like 3'-5' exonuclease from Dechlorosoma suillum PS

 Score =  154 bits (389), Expect = 1e-42
 Identities = 86/234 (36%), Positives = 141/234 (60%), Gaps = 5/234 (2%)

Query: 3   LFNWLRKKKPG--LDSAQQQRLAQLRS-PTPLGNNTLRNQRWVVVDLETSGLNLNRDQVL 59
           L  + R KKP   L   Q++RL + +  P P  N++    R+VVVD+E+SGLN+ +D+++
Sbjct: 4   LARFFRSKKPEVVLSPEQRERLERWQQLPDPDLNHSHFQTRYVVVDVESSGLNMVKDRLI 63

Query: 60  SIGAVVIEDGAVDFSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVDALLDFMDFV 119
           SIGAV + +G +D    FE  L++     + ++L+HG+G SA   G +P DALL F++++
Sbjct: 64  SIGAVAVVNGLIDTQDAFEVILKQEVVSDTANILLHGIGGSAQREGMEPADALLLFLEYI 123

Query: 120 GDSPLLAFHAPFDQHMLCRALKDSLGYRLTHPFLDVADIAPLLCPEAHIREAGLDDWINH 179
           G  PL+A+HA FD  M+ RA++  LG      +LD+A I P L  +       LD W+N 
Sbjct: 124 GKCPLVAYHAMFDHSMIARAMEKYLGIEFEQQWLDLAWIMPELFQDRIDTNVALDAWLNL 183

Query: 180 FNLHVGERHHASADALATAELMLILFSRARQQHIDTPQVLQ--ERLSQWKRRQH 231
           F +   +RH+A +D  ATA+L+ +  +RA ++  + P+ +   ER+ +W RR +
Sbjct: 184 FGIENIQRHNAVSDCYATAKLLQVAMARAAERGAECPERMMEIERVRRWLRRSN 237