Pairwise Alignments

Query, 235 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

Subject, 235 a.a., DNA polymerase III, epsilon subunit from Marinobacter adhaerens HP15

 Score =  174 bits (440), Expect = 2e-48
 Identities = 89/230 (38%), Positives = 137/230 (59%), Gaps = 2/230 (0%)

Query: 6   WLRKKKPGLDSAQQQRLAQLRSPTPLGNNTLRNQRWVVVDLETSGLNLNRDQVLSIGAVV 65
           W+  ++ G   +       L +P   G   L + R +V+DLET+GLN ++D+V++IGAV 
Sbjct: 8   WIEHRRGGKIGSHDP--GNLPNPKTPGEQLLTDCRLIVLDLETTGLNPSKDEVIAIGAVA 65

Query: 66  IEDGAVDFSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVDALLDFMDFVGDSPLL 125
           I  G +     F+  L+R E  +  +VLIHG+GP A+  G +  DALL  ++++   P+L
Sbjct: 66  IRGGIIHLGDQFDLILRRPELDIRETVLIHGIGPEALTQGHEIEDALLYLLEWMNGDPIL 125

Query: 126 AFHAPFDQHMLCRALKDSLGYRLTHPFLDVADIAPLLCPEAHIREAGLDDWINHFNLHVG 185
           A+H+ FDQ  L + LK  LGY   H ++DVAD+ P   P       GLD+W ++F L V 
Sbjct: 126 AYHSAFDQKFLEKTLKAQLGYTQPHTWMDVADLMPAFFPNTKTGGKGLDNWADYFGLEVS 185

Query: 186 ERHHASADALATAELMLILFSRARQQHIDTPQVLQERLSQWKRRQHAPSF 235
           ERHHA++DALATAEL L+  ++AR + + T + L ++L   +R Q+   F
Sbjct: 186 ERHHAASDALATAELTLVALNKARSEGVKTLKGLYDKLHYHRRLQNMHRF 235