Pairwise Alignments

Query, 640 a.a., cyclic nucleotide-binding protein from Pseudomonas simiae WCS417

Subject, 646 a.a., Predicted signal-transduction protein containing cAMP-binding and CBS domains from Pseudomonas fluorescens FW300-N2E2

 Score = 1158 bits (2995), Expect = 0.0
 Identities = 580/644 (90%), Positives = 612/644 (95%), Gaps = 4/644 (0%)

Query: 1   MSKADAFAQAGKTAVLQNIHGTLQFLQRFPPFNQMENAHLAFLVEQCQLRFYGPGDSILK 60
           M KADAF QAGKTAVLQNI GTLQFLQRFPPFNQMENAHLA+LVEQC LRFY PG++I+K
Sbjct: 3   MKKADAFTQAGKTAVLQNIQGTLQFLQRFPPFNQMENAHLAYLVEQCLLRFYAPGETIIK 62

Query: 61  PSGGPVEHFYIVKQGRVVGERPDSA----ETTFEITTGECFPLAALLGERATRTEHKAAE 116
           P+ GPVEHFYIVKQGRVVGERP +A    ETTFEITTGECFPLAALLGERATRTEH+A E
Sbjct: 63  PADGPVEHFYIVKQGRVVGERPHTAKGGTETTFEITTGECFPLAALLGERATRTEHRAGE 122

Query: 117 DTFCLQLNKPAFIKLFALSSPFRDFALRGVSSLLDQVNQQVQQKAVETLGTQYSLNTRLG 176
           DTFCLQLNK AFIKLFALS PFRDFALRGVSSLLDQVNQQVQQK+ +TLGTQYSLNTRLG
Sbjct: 123 DTFCLQLNKLAFIKLFALSGPFRDFALRGVSSLLDQVNQQVQQKSAQTLGTQYSLNTRLG 182

Query: 177 ELAMRHPVTCSPATPLREAVTLMHEQQVGSIVIVDELKAPLGIFTLRDLRQVVADGTSDF 236
           ELAMRHPV+CSP TPLREAV LMH+QQVGSIV+V+E KAP+GIFTLRDLRQVVADG  DF
Sbjct: 183 ELAMRHPVSCSPDTPLREAVKLMHDQQVGSIVVVNEQKAPVGIFTLRDLRQVVADGAGDF 242

Query: 237 SQPIEGHMTQAPFFLTPDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVD 296
           SQ I GHMTQAPFFL+PDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVD
Sbjct: 243 SQAIVGHMTQAPFFLSPDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVD 302

Query: 297 LVHLARTIRNAPRVDNLVAIRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELT 356
           LVHLARTIRNAP+V+NLVA+RGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELT
Sbjct: 303 LVHLARTIRNAPKVENLVALRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELT 362

Query: 357 LAEKGDPGVPFSWLCFGSEGRREQTLYTDQDNGILFDAKDAAEAAAIRGRLLPLAQQINQ 416
           L +KGDPGVPFSWLCFGSEGRREQTL+TDQDNGILF+A+DAA AA IRG LLP+AQQINQ
Sbjct: 363 LLDKGDPGVPFSWLCFGSEGRREQTLHTDQDNGILFEARDAAHAAQIRGLLLPIAQQINQ 422

Query: 417 SLALCGFSLCKGNIMAGNPELCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWGDE 476
           SLALCGF+LCKGNIMAGNPELCLSRAEWARRF+AFIREATPENLLGSSIYFDLRVVWGDE
Sbjct: 423 SLALCGFTLCKGNIMAGNPELCLSRAEWARRFSAFIREATPENLLGSSIYFDLRVVWGDE 482

Query: 477 RGCEQLRQTILDQVADNRLFQRMLAENALRQRPPVGRFREFVLTRKGGEKATLDLKVQGL 536
           +GCEQLR+ ILDQVADNRLFQRM+AENALR RPPVGRFR+FVL+RK GEKATLDLKVQGL
Sbjct: 483 QGCEQLRRQILDQVADNRLFQRMMAENALRHRPPVGRFRDFVLSRKNGEKATLDLKVQGL 542

Query: 537 TPFVDGARLLALANGIHANNTLERLRQLVVKEVIEPLDGAAYEEAYHFIQQTRMQQHQLQ 596
           TPFVDGARLLALANGI ANNTLERLRQLV K+VIEPLDGAAYEEAYHFIQQTRMQQHQLQ
Sbjct: 543 TPFVDGARLLALANGIEANNTLERLRQLVDKQVIEPLDGAAYEEAYHFIQQTRMQQHQLQ 602

Query: 597 SRENQPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQL 640
           +REN PYSNRVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQL
Sbjct: 603 TRENLPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQL 646