Pairwise Alignments

Query, 632 a.a., transcriptional initiation protein Tat from Pseudomonas simiae WCS417

Subject, 624 a.a., DUF839 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  743 bits (1918), Expect = 0.0
 Identities = 363/632 (57%), Positives = 445/632 (70%), Gaps = 17/632 (2%)

Query: 6   ENQATDLEQMVG--LTRRRFIGAGALCGAAMFLGGNLLTRSALAVNAASASPLLGFTSIA 63
           + Q +   +M+   L+RR F+   A   A  FL  N +   A AV A + S LL F++I 
Sbjct: 5   DEQESQFSEMIEAQLSRRHFLAGSAAVSAGAFLALNPV---ASAVAAPATSNLLNFSAIP 61

Query: 64  AATSDAITLPPGYSASVLISWGQPLSKSAPAFDPSGNGTAKAQEQQFGDNNDGMSLFAFP 123
            +T D + +P GY A+ L+SWG P+  +AP FD SG   +KAQE+QFGDN DGMS F  P
Sbjct: 62  VSTEDKVIVPKGYKATPLMSWGDPIFANAPEFDQSGKQDSKAQEKQFGDNTDGMSFF--P 119

Query: 124 GDDNRALMAINNEYTNYRYLFAHGGAPQSAEDVHKAQASEGVSVIEVRRKGDTWQFVQDS 183
             ++R ++AINNEYTNY YLF H G   +A+DV KAQA+ GV+++EV RK   W   +  
Sbjct: 120 ISEDRGVLAINNEYTNYEYLFDHQGKAMTADDVRKAQAAVGVTIVEVVRKNGQWMVDRQG 179

Query: 184 RYNRRIHGNSPIRLSGPAAGHDWLKTSADKSGKKALGTFQNCANGKTPWGTYLTCEENFT 243
             NRRI   +P+ ++GPAAGHD LKT+ D SG K LGTF NCANG+TPWGTYLTCEENF 
Sbjct: 180 ERNRRITAYTPMMMTGPAAGHDLLKTAEDPSGLKVLGTFNNCANGETPWGTYLTCEENFD 239

Query: 244 DCFGSSNPQQTFDAGQKRYGVVAASKDINWHQHDPRFDIAKNPNELNRHGWVVEIDPFDP 303
           D FG+   + + DA QKRYG+ A   D  WH+HD RFDI KNP E NR GWVVEIDP +P
Sbjct: 240 DFFGADQ-EGSVDADQKRYGIAAEPSDYQWHKHDARFDITKNPKEPNRFGWVVEIDPHNP 298

Query: 304 QSTPAKRTALGRFKHENAALAETRDGRAVVYMGDDERGEFIYKFVSRDKINHKNPKANKD 363
            STP KRTALGRFKHENAAL    DG  VVY+GDDERGE +YKFVS+ +    N + N++
Sbjct: 299 NSTPLKRTALGRFKHENAALVINNDGHVVVYLGDDERGEHLYKFVSKHRYQAGNDQQNRN 358

Query: 364 LLDHGTLYVAIFDAGDGNTDHPKGKGQWVELTHGKNGIDASTGFASQAEVLIHARLAASV 423
           LL+ GTLYVA FD    N +  KG G+W+EL+ GKNG+    GF  QAEVLI AR AA+ 
Sbjct: 359 LLEEGTLYVAKFDI---NENELKGSGRWMELSFGKNGLTPENGFKDQAEVLIFARRAATQ 415

Query: 424 VKATRMDRPEWIVVSPTDGQVYCTLTNNAKRGEEGQPVGGPNPREKNVYGQILRWKADAD 483
           V AT MDRPEW+ V P    V+CTLTNN  RG+EGQPVGGPNPREKN YGQI+RW     
Sbjct: 416 VGATTMDRPEWVAVHPDKKHVFCTLTNNKNRGKEGQPVGGPNPREKNNYGQIVRWMPAQG 475

Query: 484 NHGASTFTWDLFVVAGNPGVHAGTPKGGSSNINPQNMFNSPDGLGFDKAGRLWILTDGDY 543
           +H +  F WDL+++AGNP VH GT   GS NI+  NMFNSPDG+GFD AGRLWI TDG+Y
Sbjct: 476 DHTSDVFAWDLYLIAGNPTVHKGTLYAGSENISADNMFNSPDGIGFDTAGRLWIQTDGNY 535

Query: 544 SNAGDFAGMGNNQMLCADPATGEIRRFMVGPVACEVTGISFSPDQKTLFVGIQHPGETGG 603
           SN GDFAG GNNQMLC DP TGE++RF+ GP+ACE+TG++FSPD KT+FVG+QHPGE   
Sbjct: 536 SNQGDFAGQGNNQMLCGDPITGEVKRFLTGPIACEITGLTFSPDHKTMFVGVQHPGEEAA 595

Query: 604 STWPEHLPNG---KPRSSVMAIRRDDGGIVGA 632
              P H P G   KPRS++M I R+DGG++GA
Sbjct: 596 ---PSHFPYGGTSKPRSTIMMITREDGGVIGA 624