Pairwise Alignments

Query, 465 a.a., DNA helicase from Pseudomonas simiae WCS417

Subject, 468 a.a., replicative DNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  552 bits (1422), Expect = e-161
 Identities = 272/457 (59%), Positives = 363/457 (79%), Gaps = 6/457 (1%)

Query: 11  DLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIAKLAD 70
           D Q  A+KVPPHS+EAEQ+V+GGL+LDN  W+ V + V   DFY   HRLIF  +  + +
Sbjct: 15  DAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSRPHRLIFDGVKSILE 74

Query: 71  QNSPIDVVTLAEQLDKEGQTSQVGGLGYLGELAKNTPSVANIKAYAQIVRQRATLRQLIG 130
              P+D++TL+E L++  Q   VGG  YL +LAKNTPS ANI AYA+IV +RA +R LIG
Sbjct: 75  AGKPLDLITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYAEIVAERALVRNLIG 134

Query: 131 ISTEIADSAFNPEGRTAEEILDEAERQIFQIAEAR-PKTGGPVGVNELLTKAIDRIDTLF 189
           ++ EIAD+ ++P+GR AE++LD AE ++F IAEAR  +  GP  V+ +L + ++RI+ L+
Sbjct: 135 VANEIADAGYDPQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVDSILERTLERIELLY 194

Query: 190 NT-DAAITGISTGYTDLDEKTSGLQPSDLIIVAGRPSMGKTTFAMNLVENAVLRSDKTVL 248
            T    +TG++TG+TDL++KT+GLQ SDLIIVA RPSMGKTTFAMNL ENA +  DK VL
Sbjct: 195 KTPQDGVTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMEQDKPVL 254

Query: 249 VYSLEMPGESLIMRMLSSLGRIDQTKVRSGQLEDDDWPRLTSAVNLLNDRK-LFIDDTAG 307
           ++SLEMP E ++MRML+SL R+DQTK+R+GQL+D+DW R++S + +L ++K ++IDD++G
Sbjct: 255 IFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILMEKKNMYIDDSSG 314

Query: 308 ISPSEMRARTRRLVREHGDIALIMIDYLQLMQIPGSSGDSRTNEISEISRSLKALAKEFN 367
           ++P+E+R+R RR+ REHG ++LIM+DYLQLM++P  + D+RT EI+EISRSLKALAKE N
Sbjct: 315 LTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALT-DNRTLEIAEISRSLKALAKELN 373

Query: 368 CPVVALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVYHPETEHKGIAEI 427
            PVVALSQLNRSLEQR +KRPVNSDLRESG+IEQDAD+IMF+YRDEVYHP++  KG AEI
Sbjct: 374 VPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHPDSPLKGTAEI 433

Query: 428 IIGKQRNGPIGFIRLAFIGKYTRFENLAPGSYNFDDD 464
           IIGKQRNGPIG +RL F G Y+RF+N A  +  FDD+
Sbjct: 434 IIGKQRNGPIGSVRLTFQGHYSRFDNYAGPA--FDDE 468