Pairwise Alignments

Query, 589 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 597 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  682 bits (1761), Expect = 0.0
 Identities = 344/594 (57%), Positives = 421/594 (70%), Gaps = 7/594 (1%)

Query: 1   MPEYKAPLRDMRFLIDNVFDFHGHYAALGATDASPDMVSAILEEGAKFCENVLAPLNRSG 60
           M  Y APL D RF + +V      +A LG TDAS D+V A+LEE  +F   VLAPLN  G
Sbjct: 1   MSSYIAPLTDFRFGLYDVLGAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIG 60

Query: 61  DEEGCHFENGV--VTTPKGFKEAFAQYVEGGWHGVAADPAYGGQGLPQSLGLVLSEMIGS 118
           DE GC F+     VTTP GF+ A+ Q+VEGGW+G+ A+P +GGQG+P +LG+ LSEMI +
Sbjct: 61  DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINA 120

Query: 119 SNTSWGMYPGLTHGAMSAIHAHGTAEQKDTFLSKLTAGEWTGTMCLTEAHCGTDLGLIKT 178
           +N +WG +P L+HGAM A+  HG A Q++ FL  L  G WTGTMCLTE HCGTDLGL+KT
Sbjct: 121 ANLAWGNFPLLSHGAMEALRQHGEAWQQEVFLKPLIDGRWTGTMCLTEPHCGTDLGLLKT 180

Query: 179 RAVPQADGSYAVTGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKGISLFIVPKFHADS 238
           RA P ADGSYA+TG+KIFI+AGEHD++ NI+HLVLAKLPDAPAG KGISLF+ PKF  D 
Sbjct: 181 RAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR 240

Query: 239 ----GERNAVHCGSIEHKMGIKGSATCVLNFDGAKGFLIGEANKGLNCMFTMMNHARLGT 294
               GERNA+HCGSIEHKMGIKGS TCV+NF+GA+G+L+G  +KGL  MFTMMN ARL  
Sbjct: 241 DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSV 300

Query: 295 GMQGLCNGEASFQGAIKYANDRLQMRSLTGAKAPDKAADPIIVHPDVRRMLLTMKAFNEG 354
           G+QG+   E ++Q A++Y  +RLQ R+++GAK PDK ADPIIVHPDVRRMLLT+KA  EG
Sbjct: 301 GLQGIGLSERAYQNALRYTRERLQSRAISGAKFPDKPADPIIVHPDVRRMLLTIKALTEG 360

Query: 355 NRALTYFTAQLLDTAHLSSDATQRQDAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGH 414
           +R L    A L+D AH      +R DAE L++FLTPI KA  T+  +E T H +Q FGGH
Sbjct: 361 SRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISKACQTEWSVENTYHALQCFGGH 420

Query: 415 GYIREWGMEQLARDARIAPIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKIVHKFCAAHA 474
           GYIRE+GMEQLARDARI  IYEGT GIQALDL+GRK   SQ   L+ F   V  F   HA
Sbjct: 421 GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHA 480

Query: 475 EHPQLKAYVAQLNQLNGEWGELTTKVGMAAMKNPDEVGAAAVDYLMYSGYVVLAYLWLR- 533
           ++  L  ++  L     EW  LT  V   A +NPDE+GAA+ DYL YSGYVVLAY W R 
Sbjct: 481 DNAALAEFIKPLRDKASEWAMLTRDVLDRAARNPDELGAASYDYLFYSGYVVLAYWWARS 540

Query: 534 MAIAAAEQPDTDFAKAKLATCDFYFKRLLPRTATHRAAVEAGSECLMSLPAEAF 587
           +A A A     +F +AK  T  FYF R+LPRT TH A + +G+  LM+L AE F
Sbjct: 541 VAAADASAHGEEFKRAKRETARFYFARILPRTLTHAATIRSGAAPLMTLEAELF 594