Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

Subject, 593 a.a., acyl-CoA dehydrogenase from Sinorhizobium meliloti 1021

 Score =  466 bits (1199), Expect = e-135
 Identities = 274/602 (45%), Positives = 361/602 (59%), Gaps = 39/602 (6%)

Query: 4   YKAPLRDMRFVLNEVFEVATTWAQLPALADTVDAET--------VEAILEEAGKVTAKSI 55
           YKAP+ ++ F L  V            +A+ +DA T        V+AIL EAG+  ++ +
Sbjct: 2   YKAPVEEIAFTLKHV----------AGMAEALDAGTFGELGEDLVDAILGEAGRFASEEV 51

Query: 56  APLSRGGDEQGCRWDNTAVFTPDGFPQAYATYAQGGWVGVGGDPIFGGMGMPKAVSAQVE 115
           APL   GD QG R  + AV TP+G+ + Y  +  GGW G+     FGG  +P  +     
Sbjct: 52  APLGDAGDRQGSRLVDGAVKTPEGWRELYRNWIAGGWNGLTAPEAFGGQNLPHMLHVAAM 111

Query: 116 EMINSSSLAFGLYPMLTSGACVSINTHASEALKATYLPKMYSGEWSGSMCLTEAHAGTDL 175
           EM NS S+AF L P LT GA  ++  H ++ALKAT+LPKM SGEW G+M LTE HAG+DL
Sbjct: 112 EMWNSGSMAFALAPTLTMGAIEALEKHGTDALKATFLPKMVSGEWMGTMNLTEPHAGSDL 171

Query: 176 GIIRTKAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGPKGISLFLVPK 235
           G+++T+AE + DG+Y++ G KIFIT GEHD TDNI+HLVLA+LPDAPAG KGISLFLVPK
Sbjct: 172 GVLKTRAERRDDGTYRILGQKIFITWGEHDFTDNIVHLVLARLPDAPAGTKGISLFLVPK 231

Query: 236 FMVNADGSLGARNTVSCGSIEHKMGIQASATCVMNFDE--------AVGYLVGEPNRGLA 287
           F+VN DGSLG RN V C S+EHK+GI  S TC M + +        A+GYLVGE NRGLA
Sbjct: 232 FLVNEDGSLGERNDVFCHSLEHKLGIHGSPTCTMIYGDGKFGREKGAIGYLVGEENRGLA 291

Query: 288 AMFTMMNYERLGVGIQGLASGERSYQNAIEYARDRLQSRAPTGAQAQDKMADPIIVHPDV 347
            MFTMMN  RL VG+QG+A  E + Q AI YA++R Q RAP    + D M+ PII HPD+
Sbjct: 292 CMFTMMNNARLAVGMQGVAIAEAATQKAIAYAKERTQGRAP--GWSGDGMS-PIIEHPDI 348

Query: 348 RRMLLTMKAANEGGRAFSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLSDLGL 407
            R LLTMKA  +G RA +   A  +D+A  +    AR+  +   +LLTP+AK+F +D G+
Sbjct: 349 ARTLLTMKALTQGSRAIAYACAHAVDMAHAAQGEDARQWQER-SSLLTPIAKSFATDAGV 407

Query: 408 ETTVLGQQVFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTL 467
           +   +G QV GG G+I E G  + +RD RI  IYEGTNGIQA+DL+ RK+  S GA    
Sbjct: 408 DVASMGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVTRKLPLSDGAQVRG 467

Query: 468 FADEIR---GFIASSGTE-LAEFTKPLSAAVDNLDELTAWVLDRAKTNP-NEIGAASVEY 522
           F  E+R     +A+S  E   E    L AAV +L+  T W+L R +     E  A +  Y
Sbjct: 468 FIAELREVAAAVAASNREGFGETAARLDAAVADLEGATDWLLSRLRDGKLAEALAGATAY 527

Query: 523 LHAFGYMAYAYMWARMAKAALGKESEEDFYASKLGTARFYFARLLPRIHSLSASVKAGSE 582
              FG +      A+   A  G   ++     ++   RF    LL    +L   V  G+E
Sbjct: 528 QRLFGLVLTGVYLAKGGLAEAGDGGQD----RRVALCRFAAENLLSETSALKDRVVNGAE 583

Query: 583 SL 584
           SL
Sbjct: 584 SL 585