Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (290), Expect = 7e-31
 Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 2/288 (0%)

Query: 4   KQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLAAHT 63
           + ++YF+AV E     +AA  L +SQPALSQQ+RQLE++L   LF+RS +    T A   
Sbjct: 8   RHVQYFLAVAEHLSFTKAAAALHVSQPALSQQVRQLEESLGAQLFDRSGRTTRLTDAGDV 67

Query: 64  LYNHALPLIDGMQQAVEALRNFKGQAMRTLAIGVLQTVHTSLVPQMLERVRKAQPHLVVQ 123
              +A      +++A  A+ +       +L + V  T  T LV  +++      P + + 
Sbjct: 68  YLLYARRAYQQLREAKSAIHDVSDLTRGSLRLAVTPTFTTYLVGPVIKAFHSRYPKITLN 127

Query: 124 IYELTGLEIERRLLNGSLDIGISYLPPRQPGLHGVLLYEDELKVVIPEDHPLRAFKKVSL 183
           + E++   IE  LL G LD GI++     P +  + L  + L +V+   H L   + + L
Sbjct: 128 LKEISQERIEELLLAGELDAGIAFDEINTPNIDAIPLLNETLALVVSRQHRLAEERSIGL 187

Query: 184 KQAAELPMLLLGEEFQVRQIWQGQLSNLGRRPQVQAELNTMVGILDSLPHTKLATVLPGR 243
           +      ++LL  EF  R+            PQVQ E N +  +++ +  T L+T+LP +
Sbjct: 188 QDLNAESLILLSPEFATREQIDRYFRTHAIHPQVQMEANALGAVIEIVRRTNLSTLLPAK 247

Query: 244 SQDEHNSQSLLWKPLSEPRVPLKVGLVCRDVQRQQATMALLRTLLEDV 291
               H+   L+   L   R+     L+ R    Q A M +   + ++V
Sbjct: 248 IALAHD--DLVAIALEPERLQRTAVLMRRKDAFQSAAMRVFIEVAKEV 293