Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 337 a.a., transcriptional regulator, LysR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  104 bits (260), Expect = 2e-27
 Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 3/195 (1%)

Query: 1   MDFKQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLA 60
           M+ +QLRYF+AV EE H GRAA R+ +SQP LSQQI+ LE+ L V LF+R+S+ +  T A
Sbjct: 1   MELRQLRYFLAVAEELHFGRAARRMHVSQPPLSQQIQALEEELGVRLFDRTSRTVRATPA 60

Query: 61  AHTLYNHALPLIDGMQQAVEALRNFKGQAMRTLAIGVLQTVHTSLVPQMLERVRKAQPHL 120
              L +    L+ G+  AVE  R         L +G + +   +  P+ +   R   P +
Sbjct: 61  GEALRDDVRDLLAGLDAAVERARGTARGERGRLRLGFVVSAAATRFPRAVAAYRARCPGV 120

Query: 121 VVQIYELTGLEIERRLLNGSLDIG-ISYLPPRQPGL-HGVLLYEDELKVVIPEDHPLRAF 178
            +++ E+  L   RR+ +G LD+G +  L     G  H   L+E ++ V +P  HPL   
Sbjct: 121 RLELREMGTLLQLRRIESGELDVGLLRNLDGLPEGFDHAPFLHEPQV-VALPAHHPLARL 179

Query: 179 KKVSLKQAAELPMLL 193
             V L   A +P++L
Sbjct: 180 GVVPLAALAGVPLIL 194