Pairwise Alignments

Query, 383 a.a., pyrroloquinoline quinone biosynthesis protein PqqE from Pseudomonas simiae WCS417

Subject, 393 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 94.0 bits (232), Expect = 7e-24
 Identities = 85/349 (24%), Positives = 139/349 (39%), Gaps = 44/349 (12%)

Query: 23  ELTYRCPLQCPYCSNPLDFAEQGKELSTEQWFKVFREAREMGAAQLGFSGGEPLVRQDLA 82
           E+T  C L C +C           E ST++   +     ++G   + F+GG+P++R D+ 
Sbjct: 52  EVTRSCNLACKHCRAEAHMEPYPGEFSTDEAKALIDTFPDVGNPIIIFTGGDPMMRGDVY 111

Query: 83  ELIAEARRLGFYTNLITSGIGLTEQKISDFKKAGLDHIQISFQASDEQVNNLLAGSKKAF 142
           ELIA A   G    +  +G  +T +     K +G+    IS    D   ++   G   AF
Sbjct: 112 ELIAYATDKGLRCVMSPNGTLITPEHAQRMKASGVQRCSISIDGPDAASHDAFRGVPGAF 171

Query: 143 AQKLEMARAVKAHGYPMVLNFVTHRHNIDKIDRIIELC---------------------- 180
            Q +     ++  G    +N    R N+     I +LC                      
Sbjct: 172 EQSMRGIGYLRDAGIEFQINTTVTRDNLHSFKDIFKLCERIGAVAWHIFLLVPTGRAAGL 231

Query: 181 ---IALEADFVELATCQFYGWAQLNRVGLLPTREQLVRAERITNEYRAKLEAEGHPCKLI 237
              +   A++ E+    FY + +   + L  T      A       R + + EG     +
Sbjct: 232 SDQVISAAEYEEVLN-WFYDFRKTTSMHLKAT-----CAPHYYRIMRQRAKEEG-----V 280

Query: 238 FVTPDYY--EERPKACMNGWGSIFLTVTPDGTALPCHGARQMPVQFPNVRDHSMQHIWYD 295
            VTPD +  +   + C+ G G  F++ T  G   PC     + +   NVR+     IW  
Sbjct: 281 SVTPDNFGMDAMTRGCLGGTGFCFISHT--GQVQPC---GYLELDCGNVRNTPFPEIWRK 335

Query: 296 SFGFNRFRGYDWMPEPCRSCDEKEKDFGGCRCQAFMLTGDASNADPVCS 344
           S  F +FR  +     C  C E  K  GGCR +A+ ++GD    +P+CS
Sbjct: 336 SEHFRQFRTQEEYTGKCGPC-EYHKVCGGCRARAYNMSGDHMAEEPLCS 383