Pairwise Alignments

Query, 657 a.a., DNA primase from Pseudomonas simiae WCS417

Subject, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 1168 bits (3022), Expect = 0.0
 Identities = 568/656 (86%), Positives = 613/656 (93%), Gaps = 5/656 (0%)

Query: 1   MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60
           MAGLIPQSFIDDLLNRTDIVDVVSSR+Q+KKAGKNYTACCPFHKEKTPSFSVSPDKQFYY
Sbjct: 1   MAGLIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60

Query: 61  CFGCGAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEVPREESGRPHKPRQPTDSPLYPLL 120
           CFGCGAGGNALGF+MDHDNLDFPQA+E+LAKAAGME+PREESGR HKPRQPTDSPLYPLL
Sbjct: 61  CFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLL 120

Query: 121 TAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180
           TAAADFYRQALKSHP RKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ
Sbjct: 121 TAAADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180

Query: 181 KAMIDAGLLVENAETGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240
           +AMIDAGLL+ENAETGKRYDRFRDRVMFPIRD+RGRIIAFGGRVLGDDKPKYLNSPETPV
Sbjct: 181 RAMIDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPV 240

Query: 241 FHKGQELYGLFEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF 300
           FHKGQELYGL+EARK+NRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF
Sbjct: 241 FHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF 300

Query: 301 RVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360
           RVVP+VLFCFDGDQAGRNAAWRALEATL  LQDGRRARFLFLPEGEDPDTLVRSEGTDAF
Sbjct: 301 RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360

Query: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLKSLMRMRLQE 420
           RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANL++LMR RL E
Sbjct: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSE 420

Query: 421 ITGLSGEAVSQLVHNTPHDAPPPAYDPGMDYDAMPDYSDFHQPQEAYAPQQEWTPKKSGN 480
           ITGL+ EAV+QLVH+ P +A PPAYDPG+DYDAMPD++D+HQPQ+ YAPQQEWTPKK+G+
Sbjct: 421 ITGLNSEAVNQLVHSAPQEA-PPAYDPGIDYDAMPDFADYHQPQQDYAPQQEWTPKKTGS 479

Query: 481 DGKKWEKKPWSKNGKRGDRDEAYAPRTPVAVEAPTLIALRTLIHHPQLAEKVESADHFAN 540
            GKKW+KKPW KNGKRGDRD+  APR P AVE PTL ALRTL+HHPQLAEKVE A HFA 
Sbjct: 480 GGKKWDKKPWDKNGKRGDRDQPRAPRVPAAVEPPTLAALRTLLHHPQLAEKVEDAGHFAA 539

Query: 541 ASNTYAQVLIALIEAVQKNPKLNSIQLMARWHGTEQGRLLKALAEKEWLIDGDNLEQQFL 600
             ++  Q+L+AL+EAVQKNPKLNS QL+ARWHGTEQGRLLKALAEKEWLI+GDNLEQQF 
Sbjct: 540 EDHSNTQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLKALAEKEWLIEGDNLEQQFF 599

Query: 601 DTITRLSAGQHTQTLDELIKKARQPGLSAEEQIQIAKQMRDLLKQNVSASNPTSAG 656
           DTIT LSA Q  + L++L++KARQ  L++EE+     Q+RDLL +NV ASNPTS G
Sbjct: 600 DTITSLSARQRERNLEQLLRKARQSELTSEEK----NQLRDLLSRNVCASNPTSTG 651