Pairwise Alignments

Query, 657 a.a., DNA primase from Pseudomonas simiae WCS417

Subject, 667 a.a., DNA primase from Sinorhizobium meliloti 1021

 Score =  283 bits (724), Expect = 2e-80
 Identities = 161/396 (40%), Positives = 231/396 (58%), Gaps = 13/396 (3%)

Query: 8   SFIDDLLNRTDIVDVVSSRVQLKKAGKN-----YTACCPFHKEKTPSFSVSPDKQFYYCF 62
           SF+D++ +R  I DV+  RV   +   N     Y ACCPFH EK+PSF     K  Y+CF
Sbjct: 6   SFLDEIRDRVPISDVIGKRVTWDRRKTNVSRGDYWACCPFHGEKSPSFHCEDRKGRYHCF 65

Query: 63  GCGAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEVPREESGRPHKPRQPTDSPLYPLLTA 122
           GCG  G+   FL + + L FP+A++ +A  AG+ +P+ +     + R+ T   L  ++  
Sbjct: 66  GCGVSGDHFRFLTELEGLSFPEAVQQIADLAGVPMPQPDPQAEQRERERTS--LLDVMEL 123

Query: 123 AADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQKA 182
           A  F++  L++    KA   YL+ RGLTG     F LGFAP   + L + L+   + ++ 
Sbjct: 124 ATQFFQDQLQTANGAKARA-YLRERGLTGRTIETFRLGFAPDSRNALKEFLAGKGIGKEQ 182

Query: 183 MIDAGLLVENAETGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKP-KYLNSPETPVF 241
           +   GL+V        YDRFRDR+MFPI  +R ++IAFGGR +  D P KYLNS ET +F
Sbjct: 183 IEACGLVVHGDGIPVSYDRFRDRIMFPIPSAREKVIAFGGRAMSPDAPAKYLNSNETELF 242

Query: 242 HKGQELYGLFEARKHNRNLD---EIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKR 298
           HKG  L+    AR+ ++  D    II VEGYMDVIAL Q G+ NAVA LGTA +E  +  
Sbjct: 243 HKGNVLFNFARARRASQGADGAGTIIAVEGYMDVIALHQAGIENAVAPLGTALTENQLDL 302

Query: 299 LFRVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTD 358
           L+++    + CFDGD AG  AA RA++  L  L+ GR  RF  LPEG+DPD +VR +G +
Sbjct: 303 LWKMTTQPVLCFDGDGAGVRAAHRAVDLALPHLKPGRSVRFALLPEGKDPDDVVRHDGRE 362

Query: 359 AFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHM 394
            F  ++  +A+ LAD  +Q+  +  D  + E +A +
Sbjct: 363 PF-DKVLANARSLADMVWQREVQGGDFDTPEKRAEL 397