Pairwise Alignments

Query, 657 a.a., DNA primase from Pseudomonas simiae WCS417

Subject, 749 a.a., DNA primase DnaG from Phaeobacter inhibens DSM 17395

 Score =  285 bits (730), Expect = 4e-81
 Identities = 179/472 (37%), Positives = 255/472 (54%), Gaps = 27/472 (5%)

Query: 5   IPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYT-----ACCPFHKEKTPSFSVSPDKQFY 59
           +P  F+D+L  R  +  VV  +V   +   N       A CPFH EK+ SF V   K FY
Sbjct: 3   LPPGFLDELRTRVSLTQVVGRKVMWDQRKSNQGKGDMWAPCPFHHEKSASFHVDDRKGFY 62

Query: 60  YCFGCGAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEVPREESGRPHKPRQPTDSPLYPL 119
           YCFGC A G+AL F+ + +N+ F +A++ LA+ AGME+P  +     K  Q   + L  +
Sbjct: 63  YCFGCHAKGDALKFVQETENVGFMEAVQILAQEAGMEMPARDPRAQQK--QDHRAQLAEV 120

Query: 120 LTAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQ 179
           +  A  F+R  L +    + A  YL  RGL+G     + +GFAP GW NL+  L    + 
Sbjct: 121 MEQAVRFFRLQLNTRAG-EGARSYLARRGLSGPALERWEIGFAPEGWQNLWDALRGKGVP 179

Query: 180 QKAMIDAGLLVENAETGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGD-DKPKYLNSPET 238
           ++ ++ AGL   + + GK YD FR+R+MFPIRD+RGR IAFGGR +   D  KYLNSPET
Sbjct: 180 EELIMGAGLAKPSNKGGKPYDTFRNRIMFPIRDARGRAIAFGGRAMDPRDNAKYLNSPET 239

Query: 239 PVFHKGQELYGLFEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKR 298
            +F KG+ LY    AR  +    +++V EGYMDVIALA+ G   +VA LGTA +E  ++ 
Sbjct: 240 ALFDKGRSLYNHGPARTASGKSGQLLVAEGYMDVIALAEGGFEASVAPLGTAITENQLQM 299

Query: 299 LFRVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTD 358
           L+R+    +   DGD AG  AA R ++  L  L+ G+  RF  +PEG+DPD L+R EG +
Sbjct: 300 LWRIADEPIIALDGDTAGLRAAMRLIDLALPLLEAGKSLRFALMPEGKDPDDLIRGEGRE 359

Query: 359 AFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLKSLMRMRL 418
           A +A ++Q A P+    +Q+ TE     S E KA +       I  +   +++      L
Sbjct: 360 AVQAVLDQ-AMPMVRLLWQRETEGKVFDSPERKAALDKALRDKIRLIRDPSIRRHYGEDL 418

Query: 419 QEIT------GLSGEAVSQLVHNTPHDAPP---------PAYDPGM--DYDA 453
           Q++       G   E  +    +   DA P         PA DPG   DYDA
Sbjct: 419 QDLRWELFRGGRPREEAAGSGLDLGFDAAPDAGFDPGGRPADDPGFGADYDA 470