Pairwise Alignments

Query, 270 a.a., ribosomal RNA small subunit methyltransferase A from Pseudomonas simiae WCS417

Subject, 266 a.a., dimethyladenosine transferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  156 bits (394), Expect = 5e-43
 Identities = 101/266 (37%), Positives = 148/266 (55%), Gaps = 17/266 (6%)

Query: 8   RARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASG-GQLDVVELD 66
           RA+K  GQNFL D  +  RI   +H  P+D ++EIGPG GALT+ + A+G  +L ++E D
Sbjct: 4   RAKKSLGQNFLKDRNIAARIAAQLHIGPDDWVIEIGPGPGALTRHIHAAGPARLFLLEKD 63

Query: 67  KD------LIPILNQQFADKPNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
                   L P+     A  P   +   DAL F +  L+AA +  +V+GNLPYN+++PL+
Sbjct: 64  HHWAREHRLHPL-----AGTPEAQVVLTDALLFPWERLDAA-HPWKVIGNLPYNVASPLM 117

Query: 121 FHLLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNP 180
           + + + A  +    FM+QKEV ER+ A PG   +G LS+ +Q   + E  F V P  F P
Sbjct: 118 WDICSRAPGLLRASFMIQKEVGERIVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTP 177

Query: 181 PPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKALL---SNAEIEA 237
            PKVDSA++   P    P  A   K L RV+R  F QRRK L+  L+  +   ++A +  
Sbjct: 178 RPKVDSAVLAFTPRTDRP-DAVQSKRLARVLRLCFQQRRKQLQGILRPHVGGDASALLAG 236

Query: 238 AGVDGGLRPEQLDLAAFVRLADQLAI 263
            G+D   RPE L    F+ L + +A+
Sbjct: 237 LGIDPAARPETLSPERFIALGEAVAM 262