Pairwise Alignments

Query, 209 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (380), Expect = 1e-41
 Identities = 82/209 (39%), Positives = 128/209 (61%), Gaps = 4/209 (1%)

Query: 1   MIRVLVAEDHTIVREGIKQLIGLAKDLLVVGEASNGEQLLEALRHVPCEVVLLDISMPGV 60
           MI + + +DHTIVR G  QL+ L +D+ V GE  + +    AL     +V ++DISMP  
Sbjct: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60

Query: 61  NGLEAIARIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLTAIRKVAA 120
           NGL  + R+R  N     ++LS++D A    +AL  GA GY +K   P+ L++AIR VA+
Sbjct: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120

Query: 121 GGRYIDPDLADRMVFEVGLTDARPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTI 180
           G RY+    AD +V  +   D   + + L++RE  VF+ L QG  V +IAQ L LS KT+
Sbjct: 121 GRRYL---CADALV-NLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTV 176

Query: 181 STHKARLMQKLNITSLAELVKYAMEHKLL 209
             H+A ++ KLN+T+  +++++A++H+LL
Sbjct: 177 HVHRANILSKLNLTNNVDVIRFALQHQLL 205