Pairwise Alignments

Query, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  188 bits (478), Expect = 1e-52
 Identities = 94/261 (36%), Positives = 157/261 (60%), Gaps = 6/261 (2%)

Query: 12  VWFYSLRILCGLILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFASAEWMRAL 71
           VW  SL IL   I  F+  P+ ++IP+SF+S + L +P  G++L  Y +FF+   W + L
Sbjct: 3   VWIRSLAIL---IAAFVAAPMFIVIPMSFSSAASLAFPPPGYTLQNYVNFFSDPNWTQPL 59

Query: 72  KNSVIVAPAATVLAMVFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIIGVASYLFFA 131
            NS+++      + M+    A+  L R  F G+ +   L++ PM+VP +++ +  Y++F 
Sbjct: 60  TNSLLIGFGTVCVTMLVAVPASFALVRHVFIGRTVFNLLIMLPMIVPTIVMALGYYIYFG 119

Query: 132 PLGLGNSFFSLIVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPL 191
            L L  S+  +I+ H+ + +P   + ++A L+GF+ ++ RAA +LGASP   FR +T P+
Sbjct: 120 QLRLVQSYLGVILAHSCIALPMSTLILTAALKGFDRSVERAAMNLGASPFATFRLITFPI 179

Query: 192 IAPGVISGALFAFSTSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAAT---LL 248
           + P      LFAF  SFDE V+ LF++G ++ATLPRQMF+ +R+   PTI+AA++   LL
Sbjct: 180 LRPAFTVAGLFAFIASFDEAVIALFISGRDKATLPRQMFNAVRQEADPTISAASSFLFLL 239

Query: 249 IAFSVLLLLTLEWLRGRSEKL 269
           +   V + L  + +R R+  L
Sbjct: 240 VLAGVCIWLAPQLVRRRTRPL 260