Pairwise Alignments

Query, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 263 a.a., spermidine/putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  144 bits (362), Expect = 3e-39
 Identities = 82/244 (33%), Positives = 134/244 (54%), Gaps = 1/244 (0%)

Query: 23  LILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFASAEWMRALKNSVIVAPAAT 82
           L  ++L+LP+ ++  +SF   SF+ +P+  ++L+WY       +++ A   S+ +A A T
Sbjct: 19  LFAVYLLLPLALMTAMSFKDASFVAFPITDWTLNWYAQVLNDKQFIEASLYSIGIALATT 78

Query: 83  VLAMVFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIIGVASYLFFAPLGLGNSFFSL 142
             A V G   A+ ++     GKA++ AL   P VVP +I  ++  +F   + +     ++
Sbjct: 79  AAATVIGVWIALLVSTEGIWGKAIIFALACLPAVVPGLINAISMRIFIRTVDIPTGTAAI 138

Query: 143 IVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGVISGALF 202
           I+ HAV  VPFV+I V   L+    NLV AA  LGA    AF RVT+P + P ++ G +F
Sbjct: 139 ILSHAVHAVPFVVIMVLTRLRSMPANLVDAARDLGADRFVAFLRVTIPYLMPALLGGMIF 198

Query: 203 AFSTSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVLLLLTLEWL 262
              TS D+ V T FL G  + TLP  +F+ ++  +SP I A AT+++  +  + +  E L
Sbjct: 199 CVLTSIDDFVRTFFLGG-YKPTLPMLIFAKVQGGMSPEINAMATIVLVVTAAVGVYAEHL 257

Query: 263 RGRS 266
             RS
Sbjct: 258 TRRS 261