Pairwise Alignments

Query, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 281 a.a., Inner membrane ABC transporter permease protein YdcV from Enterobacter sp. TBS_079

 Score =  143 bits (361), Expect = 4e-39
 Identities = 86/255 (33%), Positives = 138/255 (54%), Gaps = 8/255 (3%)

Query: 27  FLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFASAEWMRALKNSVIVAPAATVLAM 86
           FL  P+L+++  SFNS S LV    G+S  WY + F     M A+  S+ +A  A  +A 
Sbjct: 22  FLYAPMLMLVIYSFNS-SKLVTVWAGWSTRWYGELFHDDAMMSAVGLSLTIAALAATMAS 80

Query: 87  VFGTLAAIGLTR-GNFPGKALVMALVISPMVVPVVIIGVASYLFFAPLG------LGNSF 139
           V GT+AA+ + R G F G      ++ +P+V+P VI G+A  L F  L            
Sbjct: 81  VLGTIAALVMVRFGRFRGSNGFAFMITAPLVMPDVITGLALLLLFVALAHAIGWPADRGM 140

Query: 140 FSLIVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGVISG 199
            ++ + H      +V + +S+ L+  + ++  AA  LGA+PL  F  +TLP+I P VISG
Sbjct: 141 LTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFIITLPMIMPAVISG 200

Query: 200 ALFAFSTSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVLLLLTL 259
            L AF+ S D++V+  F++GP   TLP  +FS +R  ++P I A A++++    ++    
Sbjct: 201 WLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALASIILGVVGIVGFIA 260

Query: 260 EWLRGRSEKLRTAQV 274
            +L  R+EK R   +
Sbjct: 261 WYLMARAEKQRVRDI 275