Pairwise Alignments

Query, 251 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 258 a.a., putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Phaeobacter inhibens DSM 17395

 Score =  131 bits (329), Expect = 2e-35
 Identities = 95/238 (39%), Positives = 133/238 (55%), Gaps = 15/238 (6%)

Query: 6   IYGVHAV-EALLRHHPKRVKQVWLAEGRSEPRVQALVELATQNKVAIGQAERREMDVWVE 64
           ++G+HAV +ALL  +PKR K   +    +E +   L +   Q+ V     + R+ +  ++
Sbjct: 25  LFGLHAVRDALL--NPKREKLRLMVTQNAEAK---LADAIAQSGVEAEVIDPRKFNPPID 79

Query: 65  --GVHQGVVADVSPSQVWGEAMLDELLDRTEGAPLLLVLDGVTDPHNLGACLRSADAAGA 122
              VHQG   +V P   WG   LDE     E  P +L+LD VTDPHN+GA LRSA+  GA
Sbjct: 80  KQSVHQGAALEVKPLN-WGG--LDENCIGAE-VPRVLLLDRVTDPHNVGAILRSAEVLGA 135

Query: 123 LAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEVS 182
            AVI  +  SA  T  + K A GA E  P + + NLA T+ +LQ+ G  V+G  GEAE +
Sbjct: 136 SAVIGTRHNSAPETGALAKTASGALERQPYLRMRNLADTIVELQRMGFLVLGLDGEAEQT 195

Query: 183 I---YDQDLTGPTILIMGAEGKGMRRLTREHCDYLVHLPMAGSVSSLNVSVATGVCLF 237
           I    D     P  L++GAEG G+R+ T+E  D+LV +  AG   SLNVS A  + L+
Sbjct: 196 IEAVLDGRKGDPVALVLGAEGPGLRQKTKETVDHLVKIDAAGGFGSLNVSNAAAIALY 253