Pairwise Alignments

Query, 251 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 252 a.a., rRNA methylase, putative, group 3 from Sphingomonas koreensis DSMZ 15582

 Score =  135 bits (341), Expect = 6e-37
 Identities = 88/238 (36%), Positives = 132/238 (55%), Gaps = 13/238 (5%)

Query: 5   KIYGVHAVEALLRHHPKRVKQVWLAEGRSEPRVQALVELATQNKVAIGQAERREMDVWV- 63
           + +G HAV A L +  + V++VW          +AL  L     + I  A+  ++   V 
Sbjct: 22  RFWGRHAVTAALANPERTVRKVWGTR-------EALAALDLPPVLPITYADVADLARMVP 74

Query: 64  -EGVHQGVVADVSPSQVWGEAMLDELLDR-TEGAPLLLVLDGVTDPHNLGACLRSADAAG 121
            +  HQG+V +V P +   E  L +LL+   +    LLVLD VTDPHN+GA LRSA A  
Sbjct: 75  SDAPHQGLVIEVDPLE---EIWLGDLLESGADDRRPLLVLDHVTDPHNVGAILRSAAAFD 131

Query: 122 ALAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEV 181
           AL ++     +   +  + + A GA E++P V V NLAR L+++ + G W +G AGEA+ 
Sbjct: 132 ALGIVTQDRHAPPESGSLARSASGALELVPWVRVVNLARALDEIGEAGFWRIGLAGEAKG 191

Query: 182 SIYDQDLTGPTILIMGAEGKGMRRLTREHCDYLVHLPMAGSVSSLNVSVATGVCLFEA 239
           ++ +        L++GAEG+GMR  T +HCD L  LP++  V SLNVS A  + L+ A
Sbjct: 192 TLAEVMGDTRPALVLGAEGEGMRHNTAQHCDELARLPISPRVESLNVSNAAAIALYAA 249