Pairwise Alignments

Query, 214 a.a., cyclic AMP receptor protein from Pseudomonas simiae WCS417

Subject, 449 a.a., Cyclic nucleotide-binding from Synechococcus elongatus PCC 7942

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 8/108 (7%)

Query: 22  RRRHPAKHNIICA-GERSETLFFIIKGSVTILIEDDDGREMIIAYLNTGDFFGELGLFEQ 80
           RRR     +++C  GE  E  + I+ G  ++ ++   GRE  IA L +G+FFGEL +   
Sbjct: 317 RRRTCVVGDVLCREGELGEEFYLILNGRFSVQVK---GREEAIATLESGNFFGELAVM-- 371

Query: 81  AGKEQERSAWVRTKVECEVAEISYAKFRELSQHDPDILYALSGQIAQR 128
              +  R+A V       +  +     R L +  P++   ++ Q+AQR
Sbjct: 372 --LDIPRTATVVALEPGTLFVVDRNNLRHLLERCPNLSQVMAEQLAQR 417