Pairwise Alignments

Query, 214 a.a., cyclic AMP receptor protein from Pseudomonas simiae WCS417

Subject, 211 a.a., cAMP-regulatory protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  261 bits (666), Expect = 9e-75
 Identities = 125/202 (61%), Positives = 164/202 (81%), Gaps = 3/202 (1%)

Query: 13  LDKLLMHCQRRRHPAKHNIICAGERSETLFFIIKGSVTILIEDDDGREMIIAYLNTGDFF 72
           L+  L HC   ++PAK  +I AGE S+TL++I+KGSV +LI+D++G+EMI++YLN GDF 
Sbjct: 13  LEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFI 72

Query: 73  GELGLFEQAGKEQERSAWVRTKVECEVAEISYAKFRELSQHDPDILYALSGQIAQRLRDT 132
           GELGLFE+   + ER+AWVR K  CE+AEISY KF++L Q +P+IL  L+ Q++ RL+ T
Sbjct: 73  GELGLFEE---QAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLAAQMSVRLQST 129

Query: 133 TRKVGDLAFFDVTGRVARCLLDLCKQPDAMTHPDGMQIKVTRQEIGRIVGCSREMVGRVL 192
           ++KVGDLAF DV GR+A+ LL L +QPDAMTHPDGMQIK+TRQEIG+IVGCSRE VGR+L
Sbjct: 130 SQKVGDLAFLDVAGRIAQTLLHLARQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRIL 189

Query: 193 KDLEERNLVHVKGKTMVVFGTR 214
           K LEE+NL+   GKT+VV+GTR
Sbjct: 190 KMLEEQNLIQAHGKTIVVYGTR 211