Pairwise Alignments

Query, 214 a.a., cyclic AMP receptor protein from Pseudomonas simiae WCS417

Subject, 221 a.a., Crp/Fnr family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score = 55.8 bits (133), Expect = 6e-13
 Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 8/183 (4%)

Query: 27  AKHNIICAGERSETLFFIIKGSVTILIEDDDGREMIIAYLNTGDFFGELGLFEQAGKEQE 86
           A   I    E ++ + +I +G + + +  + G+  ++A L  G FFGE GL      E  
Sbjct: 28  AGQTIFTQDEAADCVMYIQQGRLKLSVMSEQGKGAVVAILQPGQFFGESGLL-----EHR 82

Query: 87  RSAWVRTKVECEVAEISYAKFRELSQHDPDILYALSGQIAQRLRDTTRKVGDLAFFDVTG 146
           R A      +C V  I+ A      Q +P +    +  +  R       + D  F +   
Sbjct: 83  RRATAIALEDCTVTSITNATMMATLQREPAMCELFTRHLVARNTRVEDDLIDQLFNNSEK 142

Query: 147 RVARCLLDLCKQPDAMTHPDGMQIKVTRQEIGRIVGCSREMVGRVLKDLEERNLVHVKGK 206
           R+AR LL L    DA+     + I+++++ +  ++G +R  V   +    +   +   G+
Sbjct: 143 RLARLLLLLA---DAVEASRPVPIEISQETLAEMIGTTRSRVSYFMNKFRKAGFIDYNGR 199

Query: 207 TMV 209
             V
Sbjct: 200 IEV 202