Pairwise Alignments

Query, 875 a.a., exoribonuclease R from Pseudomonas simiae WCS417

Subject, 784 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.1 bits (126), Expect = 6e-11
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 30/153 (19%)

Query: 647 DEATRDVVNWLKCEFMKDRVGET--------FPGVITAVTGFGLFVELTDIYVEGLVHVT 698
           D+  RD     K    KD V E           GV+T VT FG FV++  ++ +GLVH++
Sbjct: 624 DKPGRDPRGEFKTAKFKDGVEELKDLKPEMILEGVVTNVTNFGAFVDI-GVHQDGLVHIS 682

Query: 699 ALPGDYYHFDPVHHRLAGERTGRSFRLGDTVEVQVMRVDLDERKIDFGM--------SDK 750
           +L  D +  DP  H +         + GD V+V+VM VD++ R+I   M        S  
Sbjct: 683 SLT-DKFITDP--HTVV--------KAGDVVKVKVMEVDVERRRIGLSMRLDEAIDQSKT 731

Query: 751 PAESPGSRKKRGSEPASKGKAAPAKATAAEPAP 783
              +P   K + ++P  + K+  A+  +  PAP
Sbjct: 732 QTRAPAQGKHQANKPNQQHKS--AQHQSGRPAP 762