Pairwise Alignments

Query, 397 a.a., elongation factor Tu from Pseudomonas simiae WCS417

Subject, 428 a.a., translation elongation factor EF-1 subunit alpha from Methanococcus maripaludis S2

 Score =  179 bits (454), Expect = 1e-49
 Identities = 146/440 (33%), Positives = 212/440 (48%), Gaps = 62/440 (14%)

Query: 1   MAKEKFDRSLPHVNVGTIGHVDHGKTTLTAALT--------------RVCSEVFGSARVD 46
           MAKEK     P +NV  IGHVD GK+T    L               R  +E  G A  +
Sbjct: 1   MAKEK-----PILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFE 55

Query: 47  FDKI-DSAPEEKARGITINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILV 105
           F  + D   EE+ RG+TI+ AH ++ +       VDCPGH D++KNMITGA+Q D A+LV
Sbjct: 56  FAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLV 115

Query: 106 CSAAD---GPMPQTREHILLSRQVGVPYIVVFLNKADLVD--DAELLELVEMEVRDLLST 160
            +  D   G  PQTREH+ LSR +G+  + V +NK D V+  +A+  E+ +M    LL  
Sbjct: 116 VNVDDAKSGIQPQTREHVFLSRTLGITQLAVAINKMDTVNFSEADYNEMKKMLGDQLLKM 175

Query: 161 YDFPGDDTPIIIGSARMA--LEGKDDNEMGTTAVRKLVETLDSYIPEPVRLTDKPFLMPI 218
             F  D+   I  ++ +   +  K +N         L + +D + P P + T  P  +PI
Sbjct: 176 VGFNPDNIDFIPVASLLGDNVFKKSENTPWYNG-PTLAQVIDGFQP-PEKPTTLPLRLPI 233

Query: 219 EDVFSISGRGTVVTGRIERGIVRVQDPLEIVGLRDTTVTTCTGVEMFRKLLDEGRAGENC 278
           +DV+SI+G GTV  GR+E GI++  D  ++V      V     VEM  + L     G+N 
Sbjct: 234 QDVYSITGVGTVPVGRVETGIIKPGD--KVVFEPAGAVGEIKTVEMHHEQLPSAEPGDNI 291

Query: 279 GVLLRGTKRDDVERGQVL---VKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFY 335
           G  +RG  + D++RG VL     P +V     FTA++ VL        +    GY P F+
Sbjct: 292 GFNVRGVGKKDIKRGDVLGHTTNPPTVA--ADFTAQIVVLQ-----HPSVMTVGYTPVFH 344

Query: 336 FRTTDV--------------TGNCELPEGVEMVMPGDNIQMTVTLIKTIAMEDGL----- 376
             T  +              TG   L E  + +  GD   + +   K + ME        
Sbjct: 345 AHTAQIACTFMELQKKLNPATGEV-LEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQL 403

Query: 377 -RFAIREGGRTVGAGVVAKI 395
            RFAIR+ G TV AG+  ++
Sbjct: 404 GRFAIRDMGMTVAAGMAIQV 423