Pairwise Alignments

Query, 442 a.a., preprotein translocase subunit SecY from Pseudomonas simiae WCS417

Subject, 447 a.a., SecY protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  469 bits (1207), Expect = e-137
 Identities = 236/426 (55%), Positives = 312/426 (73%), Gaps = 8/426 (1%)

Query: 16  SELWARLRFLFLAIIVYRIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGALERMS 75
           +EL  R+ F   A++VYR+G +IP+PGI+P  +AD+F +N G IL +F+MF+GGAL RM+
Sbjct: 21  TELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRNGGGILGMFDMFAGGALSRMT 80

Query: 76  IFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIGMS 135
           IFAL IMPYISASIIMQLMT++SPQLE LKKEGE+GR++I+QYTRY TV++  +QA G++
Sbjct: 81  IFALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRINQYTRYLTVLITALQAYGIA 140

Query: 136 VGL------AGQGVAFTGDFGFHFVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAG 189
           VGL      +G  V   G F F F  V T + G +F+MWLGEQIT RGVGNGIS++IF G
Sbjct: 141 VGLESMTSSSGAAVHDAGMF-FRFTTVVTLMGGTLFLMWLGEQITARGVGNGISLIIFTG 199

Query: 190 IVAGLPRAIGQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQG 249
           IVA LP A+    E  R G ++   ++ I +LAV +I F+VF+ER QRRI + Y KRQQG
Sbjct: 200 IVAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIVFMERAQRRILIQYPKRQQG 259

Query: 250 RKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSENMGWLQDLSQSIAPGQ 309
            K++  ++SH+PLK+N  GVIP IFASSILL P +    F   +   WL  ++  +  GQ
Sbjct: 260 NKMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQ-FSAGQGPEWLTTITTLLGHGQ 318

Query: 310 PLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLT 369
           PL + L++A I FF FFYTA++FNP+D AENLKK G FIPGIRPG  ++ Y+D VLTRLT
Sbjct: 319 PLYMALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGIRPGRNTSEYLDYVLTRLT 378

Query: 370 LFGALYMTAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQSHLVSHQYESLMK 429
             GA+Y+  + +LP+FL+    VPFY GGTSLLIVV V MD ++Q+QSHL++HQYE L+K
Sbjct: 379 AVGAIYLIFISILPEFLISKVGVPFYFGGTSLLIVVTVTMDTVAQIQSHLLAHQYEGLIK 438

Query: 430 KANLKG 435
           K+ L+G
Sbjct: 439 KSKLRG 444