Pairwise Alignments

Query, 442 a.a., preprotein translocase subunit SecY from Pseudomonas simiae WCS417

Subject, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 87/396 (21%), Positives = 161/396 (40%), Gaps = 71/396 (17%)

Query: 75  SIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQAIGM 134
           ++  LGI P ++A IIMQL+  V  +L  L       R       +   + L  ++A+ M
Sbjct: 73  TLITLGIGPIVTAGIIMQLL--VGSELISLDLSKPMNRALFQGLQKLFGIALCFLEAL-M 129

Query: 135 SVGLAGQGVAFTGDFG-----FHFVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAG 189
            VG         G FG        V V     GA+ +++L E ++  G+G+GI + I AG
Sbjct: 130 FVG--------AGAFGALTPLMTAVLVFQLALGAILIIYLDEIVSRYGIGSGIGLFIAAG 181

Query: 190 I-------VAGLPRAIGQSFESARQGDINI---FALVAIGLLAVAIIGFVVFIERGQRRI 239
           +         G    + + F +   G +     + L  +G + V ++  VV++E  +  I
Sbjct: 182 VSQTIFVGTFGAEGYLWKFFTAMTAGSLWTALEYILPILGTILVFLV--VVYVESIRVEI 239

Query: 240 AVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSENMGW-- 297
            + + +               P+K      +P I A+++    A++  W    E MG+  
Sbjct: 240 PLAHGR-------VKGAVGKYPIKFIYVSNLPVILAAALF---ANIQLWGMFLEKMGFPI 289

Query: 298 ---------LQDLSQ--------SIAPGQPLNILLFSAGIIFFC-----FFYTALMFNPK 335
                    +  L+         S     PL+ + ++  ++ FC     F+      + K
Sbjct: 290 LGHYTSGRAVDGLAYYFSTPYGISSLTADPLHAVFYTVMMVIFCILFGLFWVETSGLDAK 349

Query: 336 DVAENLKKSGAFIPGIRPGEQS-ARYIDGVLTRLTLFGALYMTAVCLLPQFLVVAANVPF 394
            +A+ L      I G R  ++S  + +   +T +T+ G+ ++        FL  AA+   
Sbjct: 350 SMAKKLGNLDMAIKGFRKSQKSIEQRLKRYITPITVMGSAFV-------GFLAAAADFTG 402

Query: 395 YL-GGTSLLIVVVVVMDFMSQVQSHLVSHQYESLMK 429
            L GGT +L+ V +V     Q+    +S  + S+ K
Sbjct: 403 ALGGGTGVLLTVSIVYRLYEQLVQEQLSELHPSIAK 438