Pairwise Alignments

Query, 464 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 95/391 (24%), Positives = 162/391 (41%), Gaps = 33/391 (8%)

Query: 20  LALVFAFRMLGMF---MVLPVLATYGMDLAGAT-PALIGLAIGAYGLTQAIFQIPFGIIS 75
           L  + A  MLG     M LP      M+ A AT P  I L++  + +  A+ Q+ +G+ S
Sbjct: 8   LVYLSALSMLGFIATDMYLPAFKM--METAFATGPEQIALSLTVFLVGMALGQLLWGLAS 65

Query: 76  DRIGRRPVIYLGLIVFALGSVLAAQSDSIWGVIAGRILQGAGAISAAVM--ALLSDLTRE 133
           D+ G R  +  GL+VF L S   A S ++W ++  R +Q  G  + AV+  A++      
Sbjct: 66  DKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPS 125

Query: 134 QHRTKAMAMIGMTIGLSFAVAMVVGPLLTRAFGLHGLFLATGGMALFGIVIVAFMVPRST 193
               +  A I   + LS A+A  +G LL   FG H +FL    + L GIV+V     ++ 
Sbjct: 126 SVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLT---LTLMGIVLVVSTGLQTN 182

Query: 194 GTLQHRESGVAR--KALLPTLKHPDLLRLDLGIFVLHAMLMCSFVALPLALVEKAGLPKE 251
              + + + +A+  K LL +  +       LG  ++ A    +F A    + E       
Sbjct: 183 EIAEPKTTSIAQDIKGLLKSKTY-------LGNVMMFACASAAFFAYLTGMPEIMAQLGY 235

Query: 252 QHWWVYLTALLISFFAMIPFII-------YGEKKRKMKRILLGAVTTLMLTELFFWQFGD 304
           Q   + L+ +  +   M+   +       YG++    + I L  ++  M+     W    
Sbjct: 236 QARDIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSS 295

Query: 305 SLRALVIGTVVFFTAFNLLEASLPSLIS--KVSPAGGKGTAMGVYSTSQFLGSALGGIMG 362
               L    ++      +    +   +S  K SPA   G    +  +   L SAL   M 
Sbjct: 296 IWPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMA 355

Query: 363 GWMFQHGGLSVVFLGCAGLAALWLAFAVTMR 393
                  G+++V   C G   LWL + ++ R
Sbjct: 356 SQAQPVTGIAIVL--CTG--GLWLGYVLSNR 382