Pairwise Alignments

Query, 464 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 5/341 (1%)

Query: 20  LALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAIFQIPFGIISDRIG 79
           L L+  F  L + + LP L            AL    I  +     + Q+  G ++D+ G
Sbjct: 17  LTLLVLFSPLAIDIYLPALPQISQAFH-VEHALAQDTITWFLFAMGVGQLFAGPLADKYG 75

Query: 80  RRPVIYLGLIVFALGSVLAAQSDSIWGVIAGRILQGAG--AISAAVMALLSDLTREQHRT 137
           RR V   G+ ++AL ++LA  + SI  ++  R+LQG G  A S A  A + DL   Q   
Sbjct: 76  RRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSG 135

Query: 138 KAMAMIGMTIGLSFAVAMVVGPLLTRAFGLHGLFLATGGMALFGIVIVAFMVPRSTGTLQ 197
           K ++ +   I    A+A ++G  LT+ FG    F    G AL   + +A  +  S   + 
Sbjct: 136 KMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMG 195

Query: 198 HRESGVARKALLPTLKHPDLLRLDLGIFVLHAMLMCSFVALPLALVEKAGLPKEQHWWVY 257
            R +          LK P  L       +  A+++    + P+ L+E+  L   +  + +
Sbjct: 196 SRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFWF 255

Query: 258 LTALLISFFAMIPFIIYGEKKRKMKRILLGAVTTLMLTELFFWQFGDSLRALVIGTVVFF 317
               +I+  A +      +K      +++G +TTLM+         +   AL     VF 
Sbjct: 256 GVNAVINIIACMTAPKVMDKLGTRWSLIIG-ITTLMIAGSLMLVLRNQASALAFMLPVFL 314

Query: 318 TAFNLLEASLPSLISKVSPAGGK-GTAMGVYSTSQFLGSAL 357
           ++         +    ++P G K GTA  +    Q  GS L
Sbjct: 315 SSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGL 355



 Score = 25.4 bits (54), Expect = 0.004
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 356 ALGGIMGGWMFQHGGLSVVFLGCAGLAAL-WLAFAVTMREP-PYVTS 400
           AL  I+G W+ Q  G    F    G A L  LA A+ ++E  PY+ S
Sbjct: 150 ALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMGS 196